Talaromyces marneffei: EYB26_001714
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Entry
EYB26_001714 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EYB26_001714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_001714
Enzymes [BR:
tmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
EYB26_001714
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
EYB26_001714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_N
CLP1_P
Clp1
ATP_bind_1
SRPRB
AAA_35
nSTAND3
MMR_HSR1
AAA_28
AAA_24
ABC_tran
Arf
TniB
Motif
Other DBs
NCBI-GeneID:
79161687
NCBI-ProteinID:
XP_054116997
LinkDB
All DBs
Position
1:complement(join(4635290..4636107,4636160..4636949,4637015..4637152))
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AA seq
581 aa
AA seq
DB search
MSLPGLELAEAAVEAQYAPPPPTQVNLRAGSEWRFEIAFGATVRVKLLTGTAELFGTELA
PLQTYTFSGTKAAIYTWHGCTLEITAGETVNTTNGFAPGGSTTFTSGVGGGGQTQGYGTG
GCQSEYVAEDTPMVEYSNVHFGLETMRQEAQTEGGKDGPRVLILGPENAGKTTLTKILTA
YATKMDRQPVVVNLDPTEGMLTVPGTLTATAFRSMIDVEEGWGSSPMSGPSPIPVKLPLV
YFYPMKSPLEADGNVFKPIVSRLALSVTARMAEDDDAREAGIIIDTDGSLGSGTPKALEL
IHHIVTEFSISTILVIGSERLYSTMVKNYDQKPTTSASATHSDERITVIKLSKSGGCVDR
DEAFMKAVNESQIRSYFFGTVATSTASAVAPSVVASISGGGGSNSNKVTLSPHTQQLDFG
SLALYNYTITSTQTEEEEEDEYDPSNFGAGAESFSSLADQQQDMTTTTTTTSSSSNAPYD
PLSSTYSFSGPTNDNDTLPLKKFTQPPTLALANSLIAITHVPPNAQLTDIRDSSIMGFVY
VADVDADKKKIRVLAPVGGRMPARALVWGKNWPGEVVGLVG
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctggattagagctagctgaagcagcagtcgaagcccaatacgctcctcct
ccacctacacaggttaatctgcgcgctgggtccgaatggaggtttgagattgcatttggt
gcgacggttcgagtcaagttactcaccggcaccgcagaactcttcggaaccgaactcgcg
cctttacaaacatacaccttcagcggcacgaaagcggcaatatacacctggcatggatgc
accttagagattacggcaggtgagactgtcaacacgacaaatggatttgcgccgggcggt
tctacgaccttcaccagcggagtaggaggaggcggtcaaacacaaggttacggcacaggt
ggatgtcaaagcgaatacgtcgccgaggacacacccatggtggaatatagtaacgttcat
ttcggcctggagacaatgaggcaagaggcccaaacagaaggcgggaaagatggacctcga
gtgttgatattgggacctgagaacgcgggcaagacgacgctgacaaaaatactgacggca
tatgcgacgaagatggatcgacaacccgtcgtggtgaatttggacccgacggagggtatg
ctgactgttccggggacattgacggcgactgcgtttcggtcgatgattgatgttgaggaa
ggatgggggagtagtcccatgtctgggcccagtcctatccctgttaagttgccattggtc
tatttttatccgatgaagagtccgctggaggcggatgggaatgtcttcaagcctattgtc
tctcgactagcgctttcggtgacggcgcgcatggccgaggatgacgatgcgcgagaggca
ggtataatcattgacacggatggcagtcttggttcagggacgccaaaagcgctggagttg
atacatcatatcgtcacggagttctctatatcaacaatccttgtcatcggctcagaacgc
ctctacagcaccatggtgaaaaactacgaccaaaaaccgaccacaagcgcatcagcaacc
cattccgacgaacgcatcacagtcatcaaactctccaaatccggcggctgcgttgacaga
gacgaagcattcatgaaagccgtcaacgaatctcaaatacgatcttacttcttcggcaca
gtggcgacgagtaccgccagcgctgtggctccgagcgtagtagcatcaatatccggtggt
ggtgggagtaatagtaataaagttacgctgtctccgcatactcaacaactcgattttgga
tccttggctttgtacaattatacaatcacgtctactcaaacagaggaggaagaagaagat
gaatatgatccatcgaattttggcgccggcgcagaatcattctcatctctcgcagaccag
caacaagatatgactaccaccaccaccaccacctcctcctcctcaaacgctccctacgac
cccttatcatcaacatactcattctccggccccacgaacgacaacgatactctgccgctg
aaaaaattcacgcaacccccaactctagccctcgcaaactccttgattgcaatcacgcac
gtcccgcccaatgcgcagctaaccgatatcagagactcgagtatcatgggctttgtttac
gttgctgatgtagatgctgacaagaagaagatccgggtcttggcgcctgttggtgggagg
atgcctgctcgagcgctggtttgggggaagaattggcctggggaggttgttgggttggtt
ggttga
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