Talaromyces marneffei: EYB26_002546
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Entry
EYB26_002546 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_002546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_002546
03041 Spliceosome [BR:
tmf03041
]
EYB26_002546
03036 Chromosome and associated proteins [BR:
tmf03036
]
EYB26_002546
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EYB26_002546
Spliceosome [BR:
tmf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
EYB26_002546
Complex B
EYB26_002546
Complex C
U2 SnRNP specific factors
EYB26_002546
Chromosome and associated proteins [BR:
tmf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
EYB26_002546
TFTC complex
EYB26_002546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
79162519
NCBI-ProteinID:
XP_054117826
LinkDB
All DBs
Position
2:join(569431..569674,569832..571905,572086..573370,573425..573451)
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AA seq
1209 aa
AA seq
DB search
MATTSNMFMYSLTLQNPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDAAQGKVTPIY
TQDVFGIIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VIPGQYLAVDPKGRACLIASVEKNKLVYVLNRNSQAELTISSPLEAHKAQTVVFALTALD
VGYDNPIFAAIEVDYSESDQDPTGRAYEEVEKQLVYYELDLGLNHVVRRWSDVIHRTSNI
LFQVPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRNGPTENPERKRSIVAGVMHKM
RGAFFFLLQTEDGDLFKLTIDMVEDENGQLTGEVKRLKIKYFDTVPIAANLLILKSGFLF
VASETGNHHFYQFEKLGDDDEETEFSSDDVSADPADPINPVYFNLRGAENLNLVESINSL
NPIMDCKITDAIGEDAPQIYTICGTGARSTFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRNDEFDAYIVLSFTNGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQVHPKGI
RHILADHRVNEWPAPQHRTIVAAATNERQVAVALSSGEIVYFEMDTDGSLAEYDEKRQMS
GTVTSLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIMS
MIDSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFGVSVKGQPAV
LALSSRPWLGYSDVQTKSFMLTSLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRIFSIEKL
DNNVLQESIPLAYTPRHFVKHPEQPLFYVIESENNVLAPATQTRLLEESKLQNGEAVIPP
AETFGYPRATGHWASCIEVVDPVNAKSVLSRLELEENESAVSIAAVSFASQDNETFLVVG
TGKDVVTYPRSFSAGFIHIYRFQEDGRELEFIHKTKIEEPPLALLAFQGRLVAGIGKNLR
IYDLGMKQMLRKCQVEAVPNLIVGLQTQGSRIIVSDVQESVTYVVYKYQENQLIPFVDDV
IARWTTATTMVDYETTAGGDKFGNLWLVRCPQKASDESDEDGSGAHLIHERSYLQGTANR
LNLMIHYYTQDIPTSLHKTNLVVGGRDILVWTGLQGTIGIMVPFISREDVDFFQNLETQL
ASQNPPLAGRDHLIYRSYYVPSKGVIDGDLCESYFLLPNDKKLMIAGELDRSVREIERKI
SDMRTRVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacatcgaatatgttcatgtattccttgacattgcagaatcctacagctgtc
acgcaagctatacttggacaattcgcaggcacaaaggagcaacagattgtaacagcttca
ggctcgaagcttaccatccatcgcccggacgccgctcaaggcaaagtcaccccgatatat
acgcaggatgtctttggaatcataaggtctcttgcagcattccggctggccggaagtagc
aaagattacatcatcatcggatcggactcgggtcgtattaccatcattgagtacgtacca
tcacagaacagattcaaccgcatccatctggagacatttggaaagtcgggtgttcgacga
gtgatacctggccagtatcttgcagtagatcccaagggacgagcttgtctgattgcttcg
gtggaaaagaacaaacttgtctacgttctgaaccggaattctcaagcagaattgacaatc
tcctctcccctcgaggcacacaaagcacaaactgttgtctttgctcttactgctttggat
gtgggatacgataatccaatattcgctgccattgaagtcgattattccgagtcagaccag
gatcccaccggccgagcatacgaggaagttgaaaaacaacttgtatactatgagcttgat
ttgggtctgaaccatgtggttcgtagatggtcagatgtcatacaccggacttcgaatata
ttgtttcaagtacctggaggcgctgatggtccgagtggtgtccttgtttgcgcagaagac
agcgtaacatatcggcactcgaaccaggatgcatttcgtgtgcccattccccgtcgcaac
ggtcctacggagaatcccgaacgaaagcgaagtattgtagcgggtgttatgcacaaaatg
aggggcgctttcttctttctgctgcagacagaagatggcgatctcttcaagttgacaatc
gatatggtcgaggatgagaatggtcaactcaccggtgaagtgaagaggttgaagatcaaa
tactttgacactgtccctatcgcagcaaacctgcttattttgaagagtggtttcttgttt
gttgcaagcgaaacaggcaatcatcacttctatcagttcgaaaagcttggcgatgatgat
gaagagaccgaattctcgagtgatgatgtttctgccgatccggctgatcctattaacccc
gtttacttcaacttgagaggcgctgagaacttgaatttggttgaaagcatcaattctttg
aatcctatcatggactgcaaaatcacggatgccatcggagaggatgctcctcaaatttac
accatttgtggtacgggagctcggagtactttcagaactctaaagcacggtctggaggtt
tctgagatcgttgagtccgaacttcctagcgttccttccgccgtttggacgacgaaactg
acccgtaacgacgaattcgatgcttatattgttctgtcattcacgaatggcactctggtt
ctcagcatcggcgagacagtggaagaagtcacagatactggctttttgtccacagcaccc
accttggccgttcaacaacttggcgaagactctttgatccaagttcatccaaagggcatt
cgacacattcttgctgatcatcgagttaatgaatggcctgcgcctcaacatcgtaccatt
gttgctgcagccaccaacgagcgccaagtcgcagttgctttgagttcaggcgagattgtg
tattttgaaatggacactgatggctcgctggccgagtacgatgagaagcgtcagatgtca
ggtacagttacatctctgagcttgggcgaggttcccgagggccgtgtccgtagttctttc
ttggccgttgggtgtgatgactcgacagtcaggattttgagtctggatccggattccaca
cttgagaacaagtccgtacaggccctaacatctgcaccatccgccttaaatataatgtct
atgatcgactcgacatctggtggttcaacgttgtatttgcacattggactgtactctggt
gtctatcttcgaacagtgcttgacgaagttactggtgagctttccgatactcgcactcga
ttcctaggcgcaaaaccagtgaagttgtttggggtctccgtcaaaggacagcctgcagtt
cttgctctcagctctcgcccatggttagggtattccgatgtccagactaaaagtttcatg
ctcacatccttggactatgtcggtctcgaatggggatggaacttttccagcgagcaatgc
ctggaaggcatggttggaatccagggccaaaatttacggattttctcgatcgagaaactc
gacaacaacgtgctacaggagtctattcctctagcatacacaccaagacattttgtgaaa
catccggaacagcctttgttctacgttatcgaatccgagaacaatgttctcgctccagcc
acgcagactcgcctattggaagaatccaaattacaaaatggagaagccgtgattcctcca
gcagaaacttttggctatccaagggctaccggtcattgggcttcttgcattgaagtcgtc
gatcctgtcaatgctaaatcggttctttcgcgccttgaacttgaagagaatgaatctgct
gttagcattgcagctgtttcgttcgcaagccaagacaacgagactttcctcgtcgttggc
acaggcaaggatgttgtcacttacccaagatccttctccgctggatttattcatatctac
cgtttccaagaagatggcagggaactggaattcattcacaaaaccaagattgaagagcct
ccacttgcccttctcgcatttcaaggacgcttggttgccggtatcggtaagaacctaagg
atctacgatcttggtatgaagcaaatgcttcgaaagtgccaggttgaagctgtaccaaat
cttattgtaggtttacagacgcaaggcagtcgtattattgttagcgatgttcaagagagt
gtgacctacgtggtgtacaaatatcaagaaaatcaactcatcccatttgtggatgatgtt
attgcgcgctggaccactgctacaacaatggtggactacgagaccacagcgggcggtgat
aaatttggtaacctgtggcttgtccgttgcccacaaaaggcgtccgacgagtccgacgaa
gacggttctggagcccatcttatccacgagcgttcatatctccagggcacagcaaaccga
ttgaatctcatgatccattattatactcaagatattcctacaagccttcacaaaacaaac
ctggttgtcggaggaagagatatcctcgtatggactggtttgcagggcactattggtatt
atggtcccattcattagtcgtgaggatgttgatttcttccaaaatctggagactcaactt
gcttcccagaacccgccgttagctggacgagaccacctgatctatcgaagctattatgtt
ccttccaagggtgttattgacggtgatctctgcgaaagctacttcttgcttcccaacgac
aagaaactcatgatcgctggtgaacttgatcgaagcgttcgggagattgaacgcaagatc
tcggatatgaggacccgtgtggcttactga
DBGET
integrated database retrieval system
