Talaromyces marneffei: EYB26_002726
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Entry
EYB26_002726 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tmf
Talaromyces marneffei
Pathway
tmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYB26_002726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_002726
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EYB26_002726
mRNA degradation factors
3'-5' decay
Pan complex
EYB26_002726
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
NusG
Motif
Other DBs
NCBI-GeneID:
79162699
NCBI-ProteinID:
XP_054118006
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Position
2:join(1036565..1036637,1036695..1036760,1036828..1036882,1036971..1037095,1037159..1037265,1037782..1038124,1038176..1039359)
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AA seq
650 aa
AA seq
DB search
MASTAKSGLDDSRRNLGSPKLRGRENAKDTLCRNVTIYGKCRYEDKGCAFNHDPLKLQNS
NQIDRKGLNVDSPSFTPTLLAANGSTPKKPNTISPKAASAAPFLPKGPGSGAQSARSDAG
SSEWSVAEIQDFVPQGFDGGQVVPLQGNGNGVLSPAPPYDPFVTPQSSIAGGSAVAPHPV
PNPYSHDAAVAASMGGAFFAGQTGFQQPVQYHLYAPIGPHSTNISGYQRNVHDLFLPNDF
REELQKKGAATLQTLPNSSLPAHVDHFHSLVPLDLTHQKNAAMFGFPSWVYKAQSNKDGN
FYVLRRLEGYRLTNEKAIRSVQAWKRITNGSVVTVHDAFTTRVFQDSSLIFVMDYHPLSK
TLAEQHLGAGNRFTARSNAHIPEQVMWSYVTQIASALKAIHSSGLAARIIDASKILLTGK
NRIRLNACAIMDVVQHDTQRSVQDLQLQDLVNFGQLMLNLGVSAAGALGSPSKAMEHFTR
VYSPQLKNSVFWLLNGLQKDQERSIDIFISGISAQLISTFDSALQMDDQLTSDLSRELEN
ARLVRLITKLNFINERPEYEHDRQWSENGERYFLKLFRDYVFHQVDAQNNAVVDLGHVLN
CLNKLDAGSEEKVTLISRDEQSCFVVSYKELKKALESSFQALLKPVRRLH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacggcgaaatcggggctcgatgattcccgtcgcaatctaggatcgccaaaa
ctcaggggacgagagaacgcaaaagatacgttgtgccgaaacgtcactatatatggaaaa
tgtcgatatgaagataagggctgcgcgtttaatcacgatcctctgaaattgcagaattca
aaccaaattgacaggaagggattgaatgtcgactcccccagtttcacgccaacgttatta
gcagcgaatgggtcgacaccgaagaagcccaacaccatatcccccaaagctgcaagcgcc
gctccatttctcccgaaaggtccaggctccggtgcacaatcagcacgctcagatgcagga
agctcagaatggtctgtggccgaaatccaggactttgtgcctcaaggatttgatggtggg
caagtggtcccacttcaaggtaacggaaacggcgttctaagtccagcacctccttatgat
cctttcgtgacgccacaaagctccatagcaggcggctctgcagtcgcacctcaccccgtt
ccaaacccgtattcgcatgatgcagcagtcgctgcttcaatgggcggtgctttctttgcg
gggcaaactggattccaacagccagtccaatatcatttatatgcaccgattggaccccac
agtacaaatatttcaggatatcaacgaaatgttcacgatctcttcttacccaatgatttc
agagaagaattgcagaagaaaggtgctgccactctgcaaacattaccaaattcttcctta
ccagcgcatgtggaccatttccactccctggtccctctggacctaactcatcagaagaat
gcggcgatgtttggatttccaagctgggtgtacaaagctcaatcgaataaagacggcaac
ttctatgttttgcgtaggcttgagggatatcgtttgacgaatgagaaagccataaggtcc
gtccaagcgtggaaaagaatcacgaacggcagtgttgttacggtccacgatgcgtttact
actcgtgtctttcaggatagctcgctgattttcgtcatggactatcatccactgtccaaa
acattggcggaacagcatttgggagcaggcaatcgttttacagcacgcagcaacgcgcac
ataccagaacaagtcatgtggagctatgtcacacagattgcatcagccttaaaagcaatc
catagcagtggccttgcagcaaggataatcgatgccagcaaaattctacttacaggcaag
aatcgaatccgcttaaatgcatgtgcgattatggatgtcgtacagcacgacacacagcga
tctgtacaagatctccagcttcaagatctggttaatttcggccaacttatgctaaaccta
ggtgtcagtgctgcgggtgccttgggcagtccaagcaaggctatggagcatttcactcgt
gtttacagtcctcaattaaagaactcggtgttttggctgttgaatggtctgcagaaagac
caggaacgcagtattgatatattcatcagcggcatctcggcgcagttgatctctacgttt
gattcggcactacaaatggatgaccagctcacttcagatttgagccgcgagctcgaaaat
gcgcgattggtgcgacttatcacgaagttgaactttatcaatgagagaccggaatatgaa
catgaccgtcagtggtcagagaatggggagcgatactttctcaagctgttccgagattat
gtcttccatcaagtggacgctcagaacaatgcagtcgtggacctcggacatgtattgaac
tgtctgaacaaactcgatgcaggtagcgaagaaaaggtaactttgatcagtcgagacgag
caaagctgttttgttgttagctataaggagctcaagaaagctcttgagtcttcatttcaa
gcgttgttgaagcctgttagacgactgcactga
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