Talaromyces marneffei: EYB26_003010
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Entry
EYB26_003010 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
tmf
Talaromyces marneffei
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_003010
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
EYB26_003010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
DUF5774
Motif
Other DBs
NCBI-GeneID:
79162983
NCBI-ProteinID:
XP_054118289
LinkDB
All DBs
Position
2:join(1815780..1815879,1815937..1818452,1818514..1818873,1818923..1819926,1819983..1820022)
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AA seq
1339 aa
AA seq
DB search
MDHQQGQSGIPGPTGRRLHIAHRRSPSELTPLMMEQLAIQQQIELLQQQQQQIAATHQQY
VNMGLLQPQQPLGQVSGFSPQLGQGTMAGVSPQVNAFQFPQQLGVPVNNGPSHRRNQSAL
PGMGMGPPPAPSSGASGSAFAELHQGSQNRENGAPSRGRGGPIGGGHQRRHSLALPEAKK
AAELAQQKRTAAGFQFPAPGSSESPTAEEKPKTPQPQGLGLQRAGNFRGGAHGRSQSMAV
GRGATGFQFPIPESSPVEPPRRGHGRTPSRNFDGNWRQPNNNNQNQDQQKLNQGGFGQQQ
SGNTFQPGHRSRASMNQSIGSIGQFQYPNAAPQLIQLPQGQVVMAPQLFNGQQLNPLQLA
QLQAMQQNGQLNGLQASQHAPQQLSAQQQQQQRKTLFTPYLPQANLPALLSNGQLVAGIL
RVNKKNRSDAYVTCTELDADIFICGSKDRNRALEGDFVAVELLDVDEVWSQKREKEEKKK
RKDITDSRSGDKLSRSDSGANGENQQVGPDGSIRRRGSLRQRPTQKKNDDVEVEGQSLLL
VEEDEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDGGHG
RQHDRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYANRIFVACIKRWPITSL
HPFGTLVEQLGEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTVASEGDALFTNR
RDLRDETTFTIDPTGTKELDDAIHIKKLGDGKVEIGIHVADVAHFVKANSLVDREAKKRG
TGVHLMTRVVNMLPPRLSNEVCSLVPGQERLTVSVVFQVDTVTGAVDDDVWIGKSVIKSS
GKLSYDDVNSAINGGTGSPLEGVNADDIRLLGAITTKFKEARFGNRTTNIPAMRLIYQLD
DENMPVELNIFDSSPAHEVIEELNYKANFFVARKLFAAMPEKAFLRRQAVPNPRRLQAFV
DRVNRLGYDIDPSSSGSLQASLFKVQDVDLRKGMETILIKAMQRAKYYVAGNVTEAQRQH
YALNLPLYAHFTSPTRRYADVIVHRQLDAVLSNGAIEFTEDVDTLVKIAEQCNNKKDSAH
NAQEQSVHIESCRVMDKKRSELGGDLISEGIVLCVYESAFDVLLPEFGFEKRVHCDQLPL
KKAEYRKDTRVLELYWEKGVPSSAYIPEDERPNASSSRAAHAAAAAQEAEAARERARERE
EAQRKQTETGTMSTDDVDALFDDDDDISEVTEMAAGVSLNSSADRPTQSMPPSPTRNGHD
GQGPHRARSDPKIAISASETPEAKMTDKEKYLKLFKLREEDGEYIQDVTELTRVPIILKT
DLSKSPPCLTIRSVNPYAL
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggaccaccagcagggccaatcagggattccaggccctaccggccgccggcttcatatt
gcccatcgacgaagtccatctgaattgacacctctgatgatggaacaacttgctattcag
caacagattgagctgctccaacagcaacagcagcaaattgccgctacgcatcaacaatat
gttaacatgggactgctgcaaccccaacaaccacttggtcaagtttcgggattctctccc
caacttggtcagggaacaatggccggcgtatcacctcaggtcaacgctttccaatttcct
cagcagctcggagttcccgtaaacaatggaccgtcccatcgccgaaaccagtctgcccta
cctggtatgggaatgggcccgccaccagctccatcttccggtgcatcaggatcggctttc
gcagagcttcaccaaggaagccaaaaccgtgagaacggtgcaccgtcgagaggacggggt
gggcctattggcggaggccatcagcgtcgtcactcattagctctcccagaagcaaagaag
gccgcagagctagcgcagcaaaagcgtactgcagccggcttccagttccccgctcccggc
tcatcagaatctcctaccgcagaagaaaagccgaagactcctcagccccaaggattgggc
ctgcagcgtgcaggcaacttccgcggtggagcccatggcagaagtcaatccatggccgtt
ggtcgtggcgcaaccggtttccaatttcctatccctgagagtagccctgtcgaacctcct
agacgcggccatggtcggacgccgtccaggaattttgacggcaattggcgacaaccgaat
aacaacaatcaaaatcaggatcagcagaagctgaaccaaggcggattcgggcaacagcaa
agtggcaacactttccaaccgggccaccgctcgcgagcatccatgaaccagtccattggc
tcgattggacaatttcaatatcctaatgctgctcctcaattgatccagctacctcagggc
caggttgtcatggctccgcagttgttcaatggccagcaactcaacccactccagctcgcc
caacttcaggctatgcagcagaatggtcaattgaacggccttcaagctagccaacacgct
cctcagcagttgtctgcacagcagcaacagcaacagcgcaagacgctcttcaccccatat
cttccgcaagcaaacctacccgccctcctcagcaatggacaacttgttgctggcatcctc
cgtgtcaacaagaaaaaccgttcagacgcttacgtcacgtgcacagaactcgatgctgat
attttcatctgtggaagcaaagatcgtaaccgagctctcgagggcgactttgttgccgtc
gaactcttggacgttgatgaggtttggtctcagaagcgtgaaaaggaagaaaagaagaaa
cgcaaggatatcaccgattctagatccggcgataagctatctcgctctgattctggcgct
aatggtgaaaaccaacaggttggccctgatggtagtattcgtcgtcgtggtagtctgcgc
cagcgtcccactcagaagaagaacgacgacgttgaggtggaagggcaaagccttttatta
gtcgaagaggacgagattagcgatgaacagaagcccttgtacgccggtcacatcgttgcc
gtcattgaacgtgtcgcaggacagatgttttcaggaactctcggtcttctacgtcctagt
agccaagctactaaggagaagcaagaggctgaacgtgccgccagagacggcggacatggt
cgccaacatgacagacagcaagacaagcccaagattgtgtggttcaagcctaccgacaaa
cgtgttcccttgattgccatccccactgagcaagcacctcgtgattttgttgaaaaacac
caagactatgcaaaccgtatcttcgtcgcttgtatcaaacggtggcctatcacctccctt
catccatttggtacactggtggagcaacttggcgagatgggtgatttgaaagtggaaaca
gatgcacttttgcgtgacaacaacttcgcagccgatgagttctcagaggctgtacttaaa
aacgtcggttgggaagactggacagtggcttccgaaggcgatgctctgtttactaaccgc
cgagacctccgcgacgaaaccacctttaccatcgatccaacaggcactaaagaactcgac
gatgctatccatatcaaaaagcttggcgatggcaaggttgaaatcggtattcacgtagcc
gacgtcgcacactttgtcaaggcgaactcgctagtcgatagagaagccaagaagagagga
accggagtccacctaatgacccgagtcgtaaatatgctaccacctcggttgtcgaacgag
gtatgctctttggttcctggccaggaacgcttgaccgtcagtgttgtcttccaggttgat
accgtgactggcgcagttgatgatgatgtgtggattggaaagagtgtcatcaagagttct
ggcaagctgagctacgatgatgtcaactccgccattaacggagggacaggaagtcctttg
gaaggtgtgaatgctgatgatattcgtcttcttggagcgatcaccaccaagttcaaagaa
gctagatttggcaaccgtactaccaatatcccagcaatgcgccttatctatcagcttgat
gatgagaacatgcctgtcgaactcaatattttcgattcatccccggctcatgaagtgatc
gaagaactgaattacaaagccaacttctttgtcgcgcgcaagctctttgctgctatgccc
gagaaagcgttccttcgacgccaagctgttccaaaccctcgccgcctccaggcttttgtt
gatcgagtgaacagactaggctatgacatcgatccttcaagcagtggttctctgcaggct
agcctgttcaaggtgcaagatgttgatcttcgcaagggtatggaaaccattctaatcaag
gcaatgcaacgcgccaaatattatgtcgccggcaatgttacggaagcacaacgccaacac
tacgctttgaatttgccgctgtatgcccatttcacaagcccaactcgtcgctacgctgat
gtcattgttcaccgtcaactggatgccgtgttgtctaatggagctattgaattcaccgag
gatgttgatacattggttaagatcgctgagcaatgcaacaataagaaggattctgctcac
aacgctcaagaacaaagtgtgcatatcgagtcctgtcgcgtcatggacaagaagcgatct
gaacttggcggcgatctcatcagcgaaggtattgttctttgcgtttacgaatcagccttt
gatgtgctccttcctgaatttggtttcgaaaagcgtgtgcactgtgaccagcttccattg
aagaaagcagaatatcgtaaggatactcgcgttcttgaattatactgggagaagggtgtt
ccatcttctgcctacattccagaagatgaacgtcccaatgcaagcagttccagagctgcc
cacgcagcagctgctgctcaagaggcggaagcagcccgcgagcgtgctcgcgagagagaa
gaggctcaacgcaaacaaactgagactggaacaatgtctacggacgacgttgatgctctc
tttgatgacgatgacgatatttcggaagtgactgagatggctgctggcgtgtcactcaat
tcctctgcggatcgcccaacacagagcatgcctccatcaccgacgcgcaatggtcatgat
ggtcaaggtccacaccgcgctcgctctgatcctaagattgcaattagtgccagcgaaacg
ccagaagcgaaaatgacagacaaggagaagtacctcaagctcttcaagcttcgggaggag
gatggcgaatatattcaagatgtgactgaactgactcgtgttcctatcattcttaagacg
gacttgagcaagagcccaccatgcctgactatccgttctgtcaacccctacgctctataa
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