KEGG   Talaromyces marneffei: EYB26_003360
Entry
EYB26_003360      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
tmf  Talaromyces marneffei
Pathway
tmf03018  RNA degradation
tmf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EYB26_003360
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EYB26_003360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmf03019]
    EYB26_003360
   03041 Spliceosome [BR:tmf03041]
    EYB26_003360
Messenger RNA biogenesis [BR:tmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EYB26_003360
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     EYB26_003360
Spliceosome [BR:tmf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    EYB26_003360
SSDB
Motif
Pfam: LSM SM-ATX LSM14 Hfq Agd3_C
Other DBs
NCBI-GeneID: 79163333
NCBI-ProteinID: XP_054118636
LinkDB
Position
2:join(2791771..2791876,2791948..2792061,2792117..2792139)
AA seq 80 aa
MENGNPSEGKDPSTFLSEITGAPVTVKLNSGVVYQGELQSVDGYMNIALEKTEEYVNGQL
RRSYGDAFVRGNNVLYISAR
NT seq 243 nt   +upstreamnt  +downstreamnt
atggaaaacggaaacccctcagaaggaaaggatccttccacttttcttagcgagatcacc
ggagctccagtgactgtgaagcttaactctggcgttgtctaccaaggcgaactccagtct
gtcgacggatacatgaatattgcattggaaaaaacagaggaatatgtgaatgggcaactg
aggcggtcttacggtgacgcttttgtgcgtggaaacaatgtactatacatttctgcgcgg
taa

DBGET integrated database retrieval system