Talaromyces marneffei: EYB26_003518
Help
Entry
EYB26_003518 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_003518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmf03041
]
EYB26_003518
03009 Ribosome biogenesis [BR:
tmf03009
]
EYB26_003518
Enzymes [BR:
tmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EYB26_003518
Spliceosome [BR:
tmf03041
]
Complex A
U1 snRNP components
U1 related factors
EYB26_003518
Complex B
EYB26_003518
Ribosome biogenesis [BR:
tmf03009
]
Eukaryotic type
Pre-60S particles
Helicases
EYB26_003518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
ERCC3_RAD25_C
Utp25_C
DUF2443
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
79163491
NCBI-ProteinID:
XP_054118793
LinkDB
All DBs
Position
2:complement(join(3212700..3212926,3212977..3213105,3213615..3213722,3213780..3214748,3214809..3214963,3215048..3215124))
Genome browser
AA seq
554 aa
AA seq
DB search
MSYRGGGSGGYGGSRDSYGGGGGGYRGGRGGSGGYSNGGHGGSNGYSNGGHGGGSYGGNG
GGDRMAALGAGLKTQDWDLSTLPKFEKSFYKEHEDVTNRSQKDVDAFRKEHQMAVTGRNV
PRPVESFDEAGFPNYVLSEVKAQGFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYC
LPAIVHINAQPLLSPGDGPIVLILAPTRELAVQIQTEISKFGRSSRIRNTCVYGGVPKGP
QIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI
RPDRQTCMWSATWPKEVRQLASDFLNDFIQVNIGSMDLSANHRITQIVEVVSDFEKRDKM
IKHLEKIMEDRKNKCLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLQEFKN
GKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDN
SKQARDLVTILSEAKQQIDPRLHEMVRYSGGGGGGRGWGGGRGRGGWHRGGGGGGGGGGY
TASNSAPLGNNRRW
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcgtggcggcggcagcggtggctacggtggctcccgtgattcctatggaggt
ggtggtggtggttacagaggaggacgtggtggcagcggtggttattccaatggcggccat
ggcggttccaatggctacagcaacggcggccacggtggaggtagctatggcggcaacggc
ggcggcgatcgtatggccgcgcttggtgctggcttgaaaactcaagactgggatctttcc
actctccccaagttcgaaaagtctttctacaaagagcacgaagatgtcacaaaccgttct
caaaaggatgtcgatgccttccgtaaggaacaccaaatggctgtcactggcaggaatgtt
cctcgcccagtcgagtcgttcgatgaggctggtttccccaactacgtcttgtctgaggtc
aaggcacaaggattcgcaaagcccactgctatccagtctcaaggatggcccatggctctc
tccggtcgcgacgtcgttggtatcgccgaaactggatctggaaagactttgacatactgt
cttcctgctattgtccacatcaacgcacagccactcctttcacccggcgatggacccatt
gtcctcattctagcacccactcgtgagttggccgttcagattcagaccgaaatcagcaaa
tttggacgctcatctcgcattcgcaacacttgtgtctacggtggtgtccccaagggccct
caaattcgtgacctcagccgtggagtcgaggtgtgcatcgccactcccggtcgtttgatt
gacatgcttgaagctggcaagaccaaccttcgtcgtgtcacttaccttgttttggacgag
gcagatcgtatgcttgatatgggttttgagcctcagattcgcaaaattattggccagatt
cgccctgaccgacagacttgcatgtggtccgccacttggcccaaggaagtccgccaactt
gccagcgactttttgaacgatttcattcaagtcaacatcggttctatggacctctccgcc
aaccaccgtattacacagatcgtcgaggttgtttcggactttgaaaagcgcgataagatg
atcaagcatctcgaaaagattatggaagaccgcaagaacaagtgtcttatcttcactggt
accaagcgtgttgccgatgacattactcgtttcttgcgccaagacggatggccagcattg
tccatccacggtgacaaacagcaaaacgaacgtgactgggtcttgcaagaattcaagaac
ggaaaaagccctattatggttgctactgacgtggcttcccgtggtattgatgttcgtgat
atcactcatgtgatcaactatgactaccccaacaactcggaggactatgttcaccgtatt
ggtcgtactggccgtgccggtgctaagggaacggccattacgttctttaccactgacaac
tctaagcaggctcgtgatcttgtcaccatccttagcgaggccaagcagcaaatcgaccct
cgtctacacgaaatggttcgctacagcggtggtggcggtggtggccgaggttggggaggt
ggccgtggtcgtggtggctggcaccgtggcggcggcggtggtggtggtggtggtggttac
actgcttccaactctgccccccttggaaacaaccgacgctggtag
DBGET
integrated database retrieval system
