Talaromyces marneffei: EYB26_004412
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Entry
EYB26_004412 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
tmf
Talaromyces marneffei
Pathway
tmf03013
Nucleocytoplasmic transport
tmf03015
mRNA surveillance pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_004412
09122 Translation
03013 Nucleocytoplasmic transport
EYB26_004412
03015 mRNA surveillance pathway
EYB26_004412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_004412
03041 Spliceosome [BR:
tmf03041
]
EYB26_004412
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
EYB26_004412
TREX complex
EYB26_004412
Spliceosome [BR:
tmf03041
]
Complex C
Other components
EJC/TREX
EYB26_004412
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EYB26_004412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
79164385
NCBI-ProteinID:
XP_054119680
LinkDB
All DBs
Position
3:complement(join(1816471..1817172,1817225..1817279,1817334..1817397,1817463..1817500,1817567..1817595,1817852..1817899,1817976..1818050,1818116..1818154))
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AA seq
349 aa
AA seq
DB search
MDRSLEEIISERPAKQQQNRRGRGGRNNSNAPRDGVKKVSFLLSPPHLQRHSISSYRDRV
DLDRDWVHDRFEDTGDSRSSRRDNRSRRERESPDSDQPARLRIENLHWDLTEEDLEGLFG
NIGPVQRVRINFDRAGRSEGTATVTYQYLEDAKQAIREFDGANAKGQPIRLTLLPAGGRG
GPRAEKSKSLFDRIERPLADRTERSLSPDGEGATGGGRRRRGGRGGRAGRSDTSKPAPDN
IDRYVPGQEQSQRSPTRRGQGGRRPGERRDDRRGGNRDGRRGANGGTGPRPKKTQEELDA
EMDDYWGNTAAAAEGGAEEKVAAAPATVATGDSAGAAPAVNDDDIDMIE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagtctggaggaaattatttcggagcgtcctgcgaagcagcagcagaatcgt
cggggacgaggcggtcgaaataatagcaatgcgccacgcgatggtgtgaaaaaggtctcc
ttcctcctctctcctcctcacctccaacgacattcaatttcctcatatcgtgaccgtgtt
gatctggatcgtgattgggttcatgatcgattcgaagatactggagactcccgttcctca
cgtcgtgacaaccggtctagacgcgagagagaatcgccggatagcgatcaaccagctcga
ttgcgcatcgaaaaccttcactgggacttgacggaggaggatttggagggcttgttcggc
aatattggaccggttcagagagttcgcatcaacttcgaccgtgccggtcgctctgaagga
actgctactgtcacataccagtacctcgaagatgccaaacaggcaattcgtgaattcgac
ggtgccaacgccaaaggccagccaatccgattgactcttttgcctgctggaggccgtgga
ggaccaagagcggaaaagtcaaagagtctctttgaccgaattgagcgtccccttgcagac
cggaccgagcgtagcctcagtcccgacggagaaggtgctacgggtggaggacgacgtcgt
cgaggcggaagaggaggacgagcaggtcgcagcgacacatcgaaaccagctccggataac
attgatcgctacgttcctggccaagaacaatcccaacgctcaccgactcgtcgaggccag
gggggccgtcgtcctggagaacgccgagatgatagacgcggcggcaacagggatggtcgt
agaggtgcgaatggtggcactggtcctcgccctaagaagacgcaggaagagctcgatgcg
gagatggatgattactggggtaataccgctgcggccgctgagggtggcgccgaggaaaag
gttgctgctgcacctgcgactgtggctacaggtgattcggctggggctgcgccggcagtg
aatgacgatgacattgatatgatcgagtag
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