Talaromyces marneffei: EYB26_004984
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Entry
EYB26_004984 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tmf
Talaromyces marneffei
Pathway
tmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYB26_004984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_004984
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EYB26_004984
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EYB26_004984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
RPW8
WKF
Snf7
DUF1192
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
79164957
NCBI-ProteinID:
XP_054120249
LinkDB
All DBs
Position
3:complement(join(3449563..3449623,3449701..3451256,3451318..3451572))
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AA seq
623 aa
AA seq
DB search
MTSRKTQQEIEKTFKKVAEGMATFEGIYEKIKVANNTTQRDRLEENLKREIKKLQRFRDQ
IKTWAAGNEVKDKTPLLEQRRAIETCMEQFKAVEKDLKTKAYSKEGLSAASRLDPKEKEK
AECCDFLSNMVDELQQRIESMEAEEEVIQASLKKGKKDVTKANRLADISRVTERHKWHVN
KLELLLRSLQNGNVEVSQVVDLKDSIKYYVEDGHNIDYSGEDETLYDDLNLGDDETAFGI
GHDNDRVSSQDTQSLPDEEQEVRTKPKADSVSGRRPSTQLKSPLPVLATLHPATTSSTTS
SPMKPAPLPTRLPGETLKYASAAAAAAASDRSGVGIAPLPPPPGSSPASSSAFPVSKAGS
TYSPGVTSVQLASRVVSTPEPTEKPSRTESPAPTQAASVKPVSATPDLPIPAAGKHETAP
SKATSSQIENGNVSKEETTPAATTTTNAQDESIYHLPPGLQDLIQSFEATKTRGEANISS
ASVQRLLAASLNSCPEPGDAEKPRHYKPQNPYNTPLYYPQEPLPIFDDHRLYDTGRIDTD
TLFYIFYYQQGTYQQYLAAKSLKNQSWRFHKLYQTWFQRHEEPKMITEEFEQGTYRFFDY
ESTWMNRRKADFKFIYKFLEDDL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcgaaagacccagcaagagatcgaaaagaccttcaagaaggtcgccgagggc
atggcaaccttcgaagggatttacgagaagattaaagttgcgaacaacacaacgcagcgg
gacagattagaagagaatctaaaacgcgaaatcaagaaactacaaagatttcgagatcag
attaagacgtgggctgcaggcaatgaagtcaaggataagacacctctgctggagcagaga
agagctattgaaacctgtatggaacaattcaaggcagtcgagaaagatttgaagaccaag
gcgtactcgaaagaaggcttatcagctgcctcccgactcgatccgaaagaaaaagaaaaa
gctgaatgttgcgattttctgtcgaatatggttgacgagctccaacaaagaatcgaatct
atggaggccgaggaagaagtgattcaggcatcactgaagaaagggaagaaggacgtgaca
aaggccaatcgcttagcagacatatcgcgagtgaccgaacgacataagtggcatgtgaac
aaactcgaattactactacggtcgctccaaaatggaaatgttgaggtatcgcaggtcgtc
gacttgaaggacagtataaaatattatgtcgaagatggtcataatatagactattctgga
gaggatgagacgctctatgacgacttaaatcttggcgacgatgaaacggcgtttggaatt
ggtcacgataacgaccgagtgtcttcgcaggatacacaatccctaccagacgaggaacag
gaggtacggacgaaaccgaaggctgattcagtatcgggacgaagaccgtcgacgcaactc
aaatcaccgctccctgtactcgccacgctccatcccgcaacaacttcatcaacgacgtca
agtcctatgaaaccagcgcctctcccgactcgactgccaggcgaaacgctaaaatatgca
tccgctgcagcggcagctgcagcgagcgatcgaagcggcgtcggtattgcaccgttgcct
cccccacctggttccagtccggcatcctcatcggcatttcctgtctcaaaggctggctcg
acatattccccaggcgtcacctcagtacaactggcatctcgtgttgtatcaacgcctgag
ccgactgaaaagccgtcccggaccgaatctccagcacctacacaagcagcaagtgttaag
cctgtatcagcaacaccagatctgcccatacccgcagcggggaagcatgaaacggctcct
tctaaagcaacatcctctcagatagagaatggcaacgtttcaaaagaagaaacgactcca
gcagcaacgacgacgacgaatgctcaagatgagtcaatttatcacttgcccccgggactg
caagacttgattcaatcttttgaagcaacaaagactcgtggcgaggctaatatttcgtcg
gcatctgtgcaaagacttctcgcagcctcactaaattcttgtccagaacctggagatgca
gaaaaaccacggcattataagccccaaaacccctacaacacaccgctttattacccacaa
gaacctcttccgatctttgacgatcaccgattgtatgatacgggacgtattgacacggat
actctattctacattttctactatcagcaggggacatatcaacagtatcttgccgcaaag
tcattgaagaaccaaagctggcgattccacaaactctaccagacttggttccaacgacat
gaggaaccaaagatgataacggaagaatttgagcaaggaacctaccgattttttgattat
gagagcacttggatgaatcgaagaaaagcggacttcaaatttatctataagttcctagaa
gatgatctatga
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