Talaromyces marneffei: EYB26_005171
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Entry
EYB26_005171 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tmf
Talaromyces marneffei
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmf01009
]
EYB26_005171
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_005171
04131 Membrane trafficking [BR:
tmf04131
]
EYB26_005171
03036 Chromosome and associated proteins [BR:
tmf03036
]
EYB26_005171
Enzymes [BR:
tmf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EYB26_005171
Protein phosphatases and associated proteins [BR:
tmf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
EYB26_005171
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
EYB26_005171
Membrane trafficking [BR:
tmf04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EYB26_005171
Chromosome and associated proteins [BR:
tmf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
EYB26_005171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
79165144
NCBI-ProteinID:
XP_054120436
LinkDB
All DBs
Position
4:join(301208..301841,301897..302185,302235..302248,302301..302439,302489..302601,302690..302817,302895..303105,303158..303269,303326..303373,303425..303488,303547..303728,303787..303866,303918..304024,304085..304306)
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AA seq
780 aa
AA seq
DB search
MDRDEDTVMRDPGSLTNIPSSTSGPSSTTLGGNVAGTGPTDDGVQPATLFEMPKLPSGLM
SPPAPITMGSTEMPGLTKSIEDEGLHIMKSSEESDSIMEETSDWSADDPASATAVGLPVA
SLPTGLCYDIRMRYHCEVRPAAEVHPEDPRRIYYIYKEICRAGLVEDPDIVATPRMLAPV
PLKRIDARNATKEEVELVHTDEHYQFVSDTQNLPDETLIMLEETRDSIYFNRLTYASALL
SAGGAIETCLAVATRKVKNAIAVIRPPGHHAEHDKTMGFCLFNNVSIAAKVCQRQLGEAC
RKILIVDWDVHHGNGIQKAFYDDPNVLYMSLHVYADGKFYPGGKEGNWDHVGEVAGLGKN
INIPWPSQGMGDGDYMYAFQQVVMPIATEFDPDLVIVASGFDAAAGDELGGCFVTPACYS
HMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPPARLAATTPSNPAVQVVR
TVMAAQSKYWRCMYPKIPTQEGLFTDRFHDIIRQYQAQQLYNNYKLTSLWIYRSSISKSF
ENQVLASANYDRAVPLIVIFHDPPEMMGVHHPITNKLEPHNCWMADVVKDYIAWATQRNY
AVIDVNIPKYVTTDTPDVGKYEEEDADRPSQTEELAGYLWDNYIEPNEATHIFFIGVGDA
YYGVANLLINRDSIYQRVNSVISFVAENPVRAVASPTQTWLSRWYKDNSLVFVSHTHGVW
HNENRRKPSKRYGRLLRSPKTGLNEMLLHHKPEVLTWIDERVNARTGDETEEEEGEEGNA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagatgaagatacggttatgcgggatcctggatctctaaccaacatcccatca
tctacctcaggcccttcctctacaacgcttggaggcaatgtcgctggcacaggaccaact
gacgatggcgtgcaaccagcgacattgttcgaaatgccgaagcttccttcaggtctgatg
tcgccgcctgcacccattactatgggctctacagaaatgccaggcttgaccaaatccatc
gaagatgagggtctacacattatgaaatccagcgaagaatcggatagcatcatggaagaa
acctccgactggtccgccgatgaccctgcgtctgcgacagcagtggggttgccagtcgca
tctctgccaacagggctgtgttatgatattcgaatgagatatcactgcgaggttcgcccc
gctgctgaagtccatcctgaggatccgcgaaggatttattatatttacaaggagatttgt
cgcgcaggacttgttgaggatccagatattgtggcgacacccaggatgcttgcgcccgtg
ccgttaaagaggattgatgcgaggaatgcgaccaaggaggaagtcgagttggtgcatacg
gatgagcactatcagtttgtgtcggatactcagaaccttcctgatgagactctgattatg
ctcgaggagactcgtgattccatatacttcaatcgactcacatatgcctctgcgctgctc
tcagctggcggcgccattgagacgtgtttggcggttgctacgcgtaaagtcaagaatgcc
attgcggtgattcggccacctggtcatcatgccgagcatgacaagaccatggggttctgt
ctgtttaataatgtatctatagctgccaaagtatgtcagcgtcaattgggggaggcgtgt
cggaagattctgattgttgattgggatgttcatcatggaaatggtatccaaaaagcattt
tacgacgaccctaatgttctctacatgtcactccatgtttatgccgatggtaaattctat
cctggaggcaaagaagggaactgggatcatgttggcgaggttgctgggctgggaaaaaac
atcaatataccatggccatcccaaggaatgggagatggcgattacatgtatgcctttcag
caggttgtaatgcccatcgcaaccgagtttgatcctgatttggtaattgtggcctcagga
tttgatgcagcagctggtgatgagctgggtggttgttttgtgacgccagcttgttactct
cacatgacccatatgctgatgacgctggctaatgggaaagtggccgtttgtcttgagggg
ggctataatttccgttccatttccaagtctgcactggcagtgacaaagactcttatgggg
gaacctcccgcgcgactcgcggccacaacgccctccaatcctgcggtacaggttgtgcga
accgtcatggctgcccagtcaaagtactggcgttgtatgtatccaaagatcccaacgcaa
gaggggttgttcaccgaccgatttcatgatatcatccgtcaatatcaggctcagcaactc
tacaacaactacaaactgactagtctgtggatctatcgttcctcgatttcaaagtcgttt
gagaatcaagttctcgcgagtgccaactatgacagggcggtgcctctgatcgtgatattc
catgacccccctgagatgatgggcgtacaccacccaatcacaaacaaacttgagccacac
aactgctggatggccgacgttgtcaaggactatatcgcatgggcaacccagcgtaactac
gccgttatcgacgtcaacatccccaaatatgtgactacagatactccggacgttggcaaa
tacgaggaggaagatgctgatcgtccaagtcagactgaggagttggctggatacttgtgg
gataattacattgaaccaaatgaagccacccatatcttcttcatcggagtcggcgacgcg
tactatggcgtggctaaccttctcatcaaccgagacagcatctaccaacgcgtcaatagc
gtgatctccttcgtcgccgaaaaccccgttcgcgctgtcgcgtcaccaacacagacgtgg
ctctcgcggtggtacaaagataattctctagtcttcgtctcccacactcacggtgtatgg
cacaacgaaaatcgccgcaagccctccaagcgatacggtcgattgttacgatcccctaaa
actgggctgaatgagatgcttctccaccataagccagaggtgcttacgtggattgatgag
cgggttaatgcacggacgggcgatgagacggaggaagaggagggtgaggaaggcaatgct
tga
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