Talaromyces marneffei: EYB26_005222
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Entry
EYB26_005222 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03440
Homologous recombination
tmf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EYB26_005222
03450 Non-homologous end-joining
EYB26_005222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmf03032
]
EYB26_005222
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_005222
DNA replication proteins [BR:
tmf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
EYB26_005222
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
EYB26_005222
BRCA1-C complex
EYB26_005222
NHEJ (non-homologous end-joining)
MRX complex
EYB26_005222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
Img2
AAA_13
AAA_22
AAA_16
YqjK
DUF3896
Motif
Other DBs
NCBI-GeneID:
79165195
NCBI-ProteinID:
XP_054120487
LinkDB
All DBs
Position
4:complement(join(428442..428450,428504..432190,432242..432325,432380..432470,432527..432554,432610..432647,432705..432757))
Genome browser
AA seq
1329 aa
AA seq
DB search
MRWLPHHPKIVMRYPHIITLSSPFIDVIFRSKIDKLSILGVRSFDNTRSETIQFHTPLTL
IVGYNGSGKTTIIECLKYATTGELPPNSKGGAFIHDPKLCGDKEVLAQVKLAFKATSGAK
MVATRSLQLTVKKTTRQQKTLEGQLLMVKDGERTAISSRVAELDQIMPQYLGVSKAILDS
VIFCHQDESLWPMSEPSVLKKKFDEIFEAMKYTKAIDNIKALRKKQNEELAKFKIMEQHS
KEDKDKADRAEKRSIKLQEEIEALREETHRISQEMRNAADLADKAWKESESYAQVIGTLE
GKRIEARSVQSTIDNLKRHLVEVDESDEWLQSTLEQFESRQLEYQQQEDAQKERYMDIKE
QIESNRDQLGLKQAEVGKYENDKDQFERQIGRRENMIKEFARENNIRGFDDTLDEPKIDE
FMRRMQKMVKEHTQALERARKEGQSEVRETQNVLNQIAQRKSAFKEAKNVARRQISDNDK
EAASVQSRLNEIDVDEGTVAVLESQKEEVQSRLERLKDVARGAKWDKDLQDANTELRSLE
NESTKLNQELIAGTKKAGDLARLAHMKKELKDRERQLETMSGAHGDRLSQLVSAQWSPDN
LEREYQNVVADVANSMTLAERNRDGIGRELDQVEFKLKDCRATLEKRKKERDQCLKKIRD
AIDDDPTEYLDILQTRQNHMDQTRKDVEQFAGMHGYFNMCLDALDQKKMCRTCMRPFKNE
TEMRTFKNRLEGLIKKNFSSSDEDLKQAEEDYENARMVNTDYDTWLRLTETAIPELEKNE
EQFQGQKEEILKKLESHDTTVDERAEKKREIESLSRTVTSIVRIDGEIKSLRSQIAEVLS
EQPQGDFSRVLEDIQNDIAAIGEKSRAIKLTISKLSSEKDQSRDDLNKAELALRDVQGSL
ANASHELEKKTGLLARVEEYKKSNAKQRESIEKADRDIDQLEPEIAKAQAKLDDISRRAE
AKERELQQALTRLSDRVNQLNLANDEIKSYIDRGGPEQLNKSRKELENIQQEIKKLEEQQ
SETTREINKISAQLKDSDNTRRQYSDNISYRQSCRLLEEVQREIQQLEEQNAEIDRSRFK
EESERWTRKHNALAAQQASKMGEMKSKDDQLLQLLADWNTDYKDAAANYKEAHIKVETTK
AAVDDLGRYGGALDKAIMKYHSLKMEEINRIVEELWQRTYRGTDVDTILIRSDNENAKGN
RSYNYRVCMVKQGAEMDMRGRCSAGQRVLASIIIRLALAECFGVNCGLIALDEPTTNLDR
DNIRSLAESLHDIIKTRQQQANFQLIVITHDEEFLHHMQCADFSDYYYRVSRNERQKSII
EKQSIAEVM
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgagatggttaccccatcatcctaagattgtgatgagatacccccatattataaccttg
tcgtctccatttattgatgtcatttttaggtcgaaaattgacaaactctccattctcggt
gtccgatcctttgacaacacccgaagcgagaccatccaattccacacgccgttgacttta
atagtaggatataatggatcgggaaagactaccatcattgaatgtctcaagtatgcaacg
accggcgaactaccgcccaacagcaagggtggcgcgttcatccatgatcccaagctgtgt
ggagataaagaggttcttgcccaggtaaaattagcattcaaagctacctccggggcaaaa
atggtggcgacccgaagcctgcaacttaccgtgaagaaaacaacgcgacaacagaaaacg
ctagaagggcagctattaatggtcaaggatggggaacgaacggcgatttcttctcgcgtt
gccgaactagatcagatcatgccgcagtacctcggcgtttcgaaagcaatcctcgactct
gtgattttctgccatcaagatgaaagtctctggccaatgagcgaaccctccgtactcaag
aagaaattcgatgaaattttcgaggccatgaaatacacaaaggcgattgacaatatcaaa
gcgctgagaaagaagcagaacgaggagttggccaagttcaaaatcatggagcagcattcg
aaggaagataaagacaaagcagaccgcgcagagaaacgatcgattaaattacaagaggag
atagaagctttgcgggaggaaacacatcggatttcacaagaaatgcgaaatgctgccgac
ttagctgataaagcttggaaagagtctgaaagttatgcgcaggtcattggtacacttgag
ggaaaacgcattgaagcaaggagcgtccagtcaacgatcgacaatctgaagcgacatctt
gtggaagtcgacgagtctgacgagtggctacagtctacgcttgagcagtttgagtcaaga
cagctcgagtatcaacagcaggaagatgcgcaaaaagagagatatatggacatcaaggaa
caaattgagtcgaaccgcgatcaattaggattgaaacaagccgaagttggaaagtatgaa
aacgacaaggatcaattcgaacgtcaaattggacgtcgagaaaacatgatcaaagagttc
gcccgagagaacaatattcgtggatttgacgatactttggatgagccgaaaatcgacgag
ttcatgcgcagaatgcaaaagatggtcaaagagcatacccaggcattagagcgggcccga
aaggaaggacaatcggaggttcgagagactcaaaacgttctcaatcagattgcgcagcga
aagtccgcatttaaagaggccaagaatgttgcgagaaggcagatttcggacaatgacaaa
gaagcagcatcagtacaaagccggctgaatgaaattgacgtagacgagggtaccgttgct
gttctcgagtcacagaaggaggaggtccaatcacggctcgagagattgaaagatgttgct
cgtggtgcgaaatgggataaagatctccaagatgccaacactgagcttaggtctcttgaa
aacgaaagtactaagctcaatcaagagcttattgcagggaccaaaaaggccggcgatcta
gcacgacttgcacatatgaagaaggaacttaaagatcgcgaacgccaattggagacaatg
tcgggcgcccacggagaccgtctctcgcaacttgtcagcgcgcaatggagcccggataac
cttgaacgtgaatatcagaatgtcgtagcggatgttgcaaatagcatgacattagctgaa
cggaatcgcgatggcattggacgagagcttgatcaagttgagttcaagctgaaggattgc
agagcaactcttgaaaagcggaaaaaagaacgtgatcaatgtctgaagaagattcgcgat
gcaatcgacgatgaccctactgagtaccttgatatcctgcaaacaagacagaaccatatg
gaccaaactaggaaggatgtcgagcagtttgcgggcatgcatgggtatttcaacatgtgt
ctggacgctcttgaccagaagaaaatgtgtagaacatgcatgagacctttcaagaacgaa
accgagatgcgaaccttcaagaacagactagaaggtcttattaaaaagaacttttcttct
tcagatgaggatttgaaacaggccgaagaagattatgaaaatgctcgaatggtgaatacc
gattacgacacctggctacgcctgacggagactgccattccagaactagaaaagaacgaa
gaacaattccaaggtcagaaggaagaaattttgaaaaaactggaaagccatgataccact
gttgatgaacgagcggagaagaagcgagaaatcgagtctctttcccgcactgtgacgtct
atagttcgcattgacggggagatcaaatccctgcgttctcaaatagcagaagtgttatct
gagcaaccccagggcgacttctcgcgggttttggaagatatccaaaatgatatcgcggca
atcggggagaaatcgagagctatcaagttgaccatctctaagctctcttcagagaaggat
cagtctcgagatgacctcaataaggccgaattagcgctcagagacgtacagggcagtctt
gccaatgctagccatgagcttgagaagaagacaggtcttctcgctcgtgtcgaggaatat
aagaagtcgaacgcaaagcagcgagagtcgattgaaaaggctgatcgtgatatcgatcag
ctggagccagagattgctaaagctcaggcaaaacttgacgatatcagccggcgtgctgaa
gctaaagaacgggaactccaacaagctttgacacgtctttctgaccgcgtaaatcaactg
aatcttgctaacgatgaaatcaagtcatacattgatcgtggcggtccagagcagttgaac
aaaagcaggaaggagctagagaacattcagcaagaaatcaagaagctagaagagcaacaa
agtgaaaccacccgtgagattaacaagatatccgcccaacttaaagacagtgacaatacc
agaagacagtactcagacaatatatcttaccgtcaatcatgcagattgttagaggaggtc
cagcgcgagatacagcaactggaagaacagaacgcagagattgaccggagccgattcaag
gaagagtcagagcgatggacgcgaaagcataatgcacttgctgcccagcaggcaagtaaa
atgggcgaaatgaagtcaaaggacgatcaactcttacaattacttgctgattggaatacc
gactacaaagatgcggctgctaactacaaggaggctcacatcaaagtggaaaccaccaaa
gcagcagtcgacgatctcggtcgttacggaggagctttggacaaggctattatgaagtac
cacagtctcaagatggaagagatcaatcgcattgtcgaggagctttggcagcgaacctac
cgaggcacagacgtggataccatcttgatcaggtccgataacgagaatgccaaaggaaat
cgctcctacaactaccgcgtttgtatggtcaaacaaggagcagaaatggatatgcgtggt
cggtgcagtgccggacaaagggttctcgccagtattatcattcgtcttgctttggccgaa
tgcttcggcgtcaattgtggtctcattgcgctggatgagcctacgacaaacctggatagg
gacaatatccgttctttggcagaatcattgcatgatattatcaaaacacgccagcagcag
gccaactttcagctgattgtcatcacccacgatgaggagttcctgcatcatatgcagtgt
gctgatttcagtgattattactaccgagtctcgcgaaatgaacggcagaaatctatcatt
gagaagcagtccattgctgaggttatgtga
DBGET
integrated database retrieval system
