Talaromyces marneffei: EYB26_005388
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Entry
EYB26_005388 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tmf
Talaromyces marneffei
Pathway
tmf03022
Basal transcription factors
tmf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYB26_005388
09124 Replication and repair
03420 Nucleotide excision repair
EYB26_005388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_005388
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_005388
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EYB26_005388
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EYB26_005388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
79165361
NCBI-ProteinID:
XP_054120649
LinkDB
All DBs
Position
4:join(920703..920844,920938..922721)
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AA seq
641 aa
AA seq
DB search
MATPSASASYKKKDGTLTVSKDQKSISWIPAAGGAGSAVTVPVQNMTNLQQTPASNPKVM
LRIFAQQNETQEQYVFTFTSGTNARAEADAIKDVLSAAIAAAKASSAPAALGVGTPGAEG
GGLSAAMAMANAISSSGTGLAIWDNDDKLKTDAELQQSLLKSDANLQRMFMESLRTRPET
LSVGQFASQFWSSRVHLLRAHAIERAQTRGSYNVLSSLKPRTDNNVTKLNITKEQIQLIF
HQHPLVKKVYDENVPKLSEQQFWSRFFQSRLFKKLRGERISDSDATDAILDKYLKIDEHA
DRVRNAQVPHFIDLAGNEVNHSQRQGNRPDFDMRPASIDKVPIIRTLNALSESIMANVAP
ADGDPSAPVGMDEETYNQLLLRDLKGDEEQSRIILNIRDQSRFFGQDKEREEKEKKEALF
AQRDPKEIIVSLQTDLDQTLPADGSFHLGKIVEPDEDDDDDEDEEKASKVVGSKINMQKA
SNEIFGIIRERRAQADVTSDSGTWGLSSTLFDRLSLTHATSTEFLNQFWNAFLSGNPDRA
GELASLVESLNRAMERIKAVATDAETEKETEINKLKQHAREVFAATGKKIRVNLAGVGGG
EKVVNQLLGPTISALKLAVDRYKEALAEATAASAREDSMAL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggccactccatctgcatcggcttcatacaaaaagaaggacggcacactcacagtttcg
aaggaccagaaatcgatatcatggattccagcggcgggcggtgctgggagtgcggtgacg
gtgcctgtgcagaatatgactaatctacagcaaacacccgcaagcaaccccaaagtcatg
ctccgaatcttcgcgcaacaaaacgaaactcaagaacaatacgtcttcacgtttacgtca
ggcaccaacgcccgtgccgaagcagacgcgatcaaggatgtgctcagcgccgctattgca
gctgccaaagcttcctccgcgcctgctgccctgggagtcgggacaccgggcgccgaggga
ggaggattatcggcggcgatggcgatggcgaacgcaatttcgtcttcgggcacgggactc
gctatctgggataatgacgataaattgaaaacggatgcggaattgcagcagtcactactc
aagtctgatgcaaacttacaacgaatgttcatggagtcgcttcgcacgagaccggagaca
ttgtcggttggccagtttgcgtcgcagttttggtcgagtcgagtccatttgttgcgggcc
cacgctatagaaagagcgcagacccgagggtcgtataatgtgctgtcgagcctgaaaccg
cgtacagacaacaacgtcacaaaactcaatatcaccaaggagcagattcagttgattttc
catcaacaccctctagtgaaaaaggtctacgatgagaatgttccgaaactgagtgagcag
cagttttggtcccggtttttccagagtcggttgtttaaaaagcttcgaggggagcgtata
tctgactccgatgcaacggatgcgattctggataaatacctgaaaattgacgaacatgcc
gaccgggttagaaatgcgcaggtaccgcattttattgacttagctgggaatgaggtcaat
cacagtcaacggcagggaaatcgtcctgactttgatatgcggcctgcgtcgattgacaaa
gtccctattattcggacgttgaacgcattgagtgaaagtatcatggccaacgtggcacca
gctgacggcgatccatctgcgccggtgggaatggatgaggagacgtacaatcagctacta
ctacgagatctcaagggcgacgaagaacagagccggattatcttgaatattcgcgaccag
agccggtttttcggtcaggataaggaaagggaagaaaaagagaagaaagaggcgttgttt
gcccaacgtgatccaaaggagattatagtatctttacaaacggatcttgatcagacttta
cccgctgatggctcgtttcatcttgggaaaatcgttgagccggatgaagacgacgatgat
gatgaagacgaggaaaaggccagcaaagtggttggatcaaagatcaacatgcaaaaagcc
tctaacgagatctttggcatcatccgtgaacggcgcgcacaggcagacgtgacgtctgac
tcgggaacatggggtctgtcttctacactattcgaccgtctatcactcacacacgcaacc
tcgacggaattcctgaaccagttctggaatgcctttctatccggcaaccccgaccgcgcc
ggcgaactcgcctcgctcgtcgaatccctcaaccgcgccatggagcgcatcaaagccgtc
gcaacggacgcagagaccgaaaaggaaacagaaatcaataaactcaaacaacacgcgcgc
gaagtctttgcggctacaggcaaaaagattcgtgtcaatcttgctggcgtcggtggagga
gagaaggtggttaatcagttacttggaccgactatatcggcgctcaagttggcggttgat
aggtacaaggaggcgttggcggaggcgacggctgcgtccgccagggaagattcaatggct
ttatga
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