KEGG   Talaromyces marneffei: EYB26_005415
Entry
EYB26_005415      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tmf  Talaromyces marneffei
Pathway
tmf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EYB26_005415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmf03400]
    EYB26_005415
Enzymes [BR:tmf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     EYB26_005415
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     EYB26_005415
DNA repair and recombination proteins [BR:tmf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     EYB26_005415
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH Fpg-like_C NFACT_N Ribosomal_S13
Other DBs
NCBI-GeneID: 79165388
NCBI-ProteinID: XP_054120675
LinkDB
Position
4:join(980952..981544,981597..982092)
AA seq 362 aa
MPELAEVARIVHFIRKHLVGKTLANVQAQNDDIVYGKVGTSAAEFQKAMQGNKVIGAGQQ
GKYFWITMSKPPHVVMHFGMTGWMKIRNADTYYYRTTNADDKEWPPKYWKFLLETDENPK
TEAAFVDPRRLARIRLVDCPADEIRQYTPLKENGPDPVTDKDILTIEWLQDKIKSKRVPI
KALLLDQANISGIGNWMGDEILYHSKIHPEQYSNTLTDEQIKQLHTSIDYVCTTSVGVLA
DSEQFPEEWLFKHRWGKGKKNQPSVLPNGNKIVFLTVGGRTSAVVPSVQRKTGPVAKEIS
DEDLEDNKETKVAVNGKRKRAAVKEEEEDKDAIVAPKRAASRRGNRSSAKASTPRRVKKE
RD
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcccgaactcgcagaagttgcgcgtatcgtgcacttcatccgaaaacatctcgtgggc
aagactctggcaaacgtgcaagcgcaaaatgacgatatcgtctacgggaaagtgggcacg
agcgctgctgagtttcaaaaggcaatgcagggcaacaaagtcatcggtgctggccagcag
ggtaaatatttctggatcacaatgtcaaagcctccgcatgttgtgatgcattttggcatg
acaggctggatgaaaatccgaaatgcggatacatactactaccgtacaaccaacgcggat
gacaaagagtggcctccaaaatactggaagtttctgcttgagacagacgagaacccaaag
acagaggccgcgttcgtggaccctcgcagattagcgagaatacggcttgttgattgtccg
gctgatgaaattcgacaatatactcctctcaaagaaaatggaccggatcccgtcacagat
aaggacattttgaccatcgaatggttgcaagataaaatcaaaagcaaaagagtcccaatc
aaggctctgctacttgatcaagccaacatcagtggcattggcaactggatgggtgacgaa
attctgtatcactccaagatacacccggagcaatatagtaacacattgacggacgaacaa
ataaaacaacttcatacctctattgactatgtctgcacgacatctgttggggtgcttgct
gattcggaacagtttcctgaagaatggcttttcaaacatcgatggggcaaaggaaagaag
aaccagccttctgtacttccgaatggcaacaagattgtatttcttaccgttggcggaagg
accagtgccgttgtaccgtcagttcaacgaaagactggcccagtggcaaaggagatcagc
gatgaagacttagaggacaacaaggaaacgaaagttgccgtgaatggcaaacgaaagcga
gctgctgtgaaggaagaggaagaggacaaggatgcaatagtcgcaccaaaacgggcagca
tctagaaggggcaacagatctagcgcaaaagctagcactccgagacgtgtgaagaaagag
cgggattga

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