KEGG   Talaromyces marneffei: EYB26_005435
Entry
EYB26_005435      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
tmf  Talaromyces marneffei
Pathway
tmf03013  Nucleocytoplasmic transport
tmf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EYB26_005435
  09122 Translation
   03013 Nucleocytoplasmic transport
    EYB26_005435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmf03019]
    EYB26_005435
   03041 Spliceosome [BR:tmf03041]
    EYB26_005435
Messenger RNA biogenesis [BR:tmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     EYB26_005435
Spliceosome [BR:tmf03041]
 Complex C
  Other components
   EJC/TREX
    EYB26_005435
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    EYB26_005435
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Cytochrom_D1 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_EIPR1 Tricorn_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N eIF2A Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR41 Beta-prop_DCAF12 Beta-prop_SPT8 B-prop_COPA_B_2nd Beta-prop_ACSF4 WDR54 PALB2_WD40
Other DBs
NCBI-GeneID: 79165408
NCBI-ProteinID: XP_054120695
LinkDB
Position
4:join(1022644..1022762,1022838..1023810)
AA seq 363 aa
MASKQPDRRLIHKDRFGYVFGNLKTQNYQDPVARGPGSHTIRTLAWNPTGTLIATGSANR
TLRIWNPERANARYSTELRGHTAGIEKVIFNPVRDAELASCSSDGTVRFWDVRSKTCVSK
LDVGGEAFTLSWSADGRVVMVGRKDDTLVPVSVESTSTPTVNTGPPGSSVAEQKVSSTYT
ILPPHPQNTQTNATTFSYHIPTPSAPDLDLLATTGDGTVRIFSYPSFNLQHTLNAHSSAC
LALALAPTSRYLAVGGSDALISLWDTTDWVCRRTVSSEGGGTIRGVSWSFDGRFLCGSSE
EVGPNGLEIFHAETGDSVHKIAVSAGVPAVAWHPTRYWLAYSLMAEGSNAGGLRIVGAAG
GGL
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcctcaaaacagcccgaccgtcggctcatacacaaggatcgctttggctatgtattc
ggcaatctaaagacacagaattatcaagaccccgttgcgcgcggacctggttcgcacact
ataagaacactagcctggaacccaaccggcaccctcatagccacgggctccgcaaaccgc
accctacgaatatggaaccccgagcgcgccaacgcgcgctactcaaccgaactgcgcggc
cacacagccggcatcgagaaagtgattttcaaccctgttcgcgacgccgagctcgcgagt
tgttccagcgatggtacagtacggttttgggatgtgcgttcaaaaacgtgcgtgagtaaa
ttggatgttggaggcgaggcgtttacgttgtcgtggtcggcggatggacgggttgtgatg
gtgggtaggaaggatgatacacttgttcctgtttcggtggagagtacgtcgacaccaaca
gtaaacactgggccgcccggttcttcggttgcagagcaaaaagtgtcgtcgacgtatacg
atattacctccccacccgcaaaatacacagacgaatgcgactacgttctcatatcatata
cccacaccctccgcaccggacctcgatcttctcgcgactacgggcgacggcacagttcga
atattttcttatccttctttcaacctgcaacacaccttgaacgcacacagttcagcctgc
ttagcactcgccctagcgcccacaagtcgttatttggctgtcggcggcagcgatgcctta
atatcactctgggacacgactgactgggtctgtcgacgcacagtttcgagtgagggaggc
gggacaatccggggtgttagttggagttttgatggcaggtttctgtgcggctcaagtgaa
gaagtaggacctaacggcctcgaaattttccatgcggagacgggagatagtgtgcacaag
attgcggtgagtgcgggcgtgcctgcggttgcgtggcatccgacgaggtattggttggcg
tattcgcttatggcggaggggagtaacgcgggcggattgaggattgtgggtgctgctggg
ggtggactgtaa

DBGET integrated database retrieval system