KEGG   Talaromyces marneffei: EYB26_005781
Entry
EYB26_005781      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tmf  Talaromyces marneffei
Pathway
tmf03030  DNA replication
tmf03410  Base excision repair
tmf03420  Nucleotide excision repair
tmf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EYB26_005781
   03410 Base excision repair
    EYB26_005781
   03420 Nucleotide excision repair
    EYB26_005781
   03430 Mismatch repair
    EYB26_005781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmf03032]
    EYB26_005781
   03400 DNA repair and recombination proteins [BR:tmf03400]
    EYB26_005781
Enzymes [BR:tmf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EYB26_005781
    6.5.1.6  DNA ligase (ATP or NAD+)
     EYB26_005781
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EYB26_005781
DNA replication proteins [BR:tmf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EYB26_005781
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EYB26_005781
DNA repair and recombination proteins [BR:tmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EYB26_005781
   NER (nucleotide excision repair)
    Other NER factors
     EYB26_005781
   MMR (mismatch excision repair)
    Other MMR factors
     EYB26_005781
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 79165754
NCBI-ProteinID: XP_054121039
LinkDB
Position
4:join(2063221..2063258,2063386..2065387,2065448..2065996)
AA seq 862 aa
MPEKTGTRQATLGKFFGSDRQNSTDAAKRQTTLSFSNGNRRKEKTTSDKPVKEPKESEGQ
DDMDLNGDASAANNGSTSPTKGVKRDQSAEAEESDDSDIQPATKKRRKNAKSPRPRKSAK
EIVAERPSSPKVSKKASGEVTPVEEDADEPAEDPSASEEDEDEKPEIKKKQIEKVQATLK
STGNDPYPDWKAGEPVPYAALCTTFSLIEMTTKRLIILAHASLFLRQVLRLTPEDLLPTV
QLMINKLAADYSGIELGIGESLIMKAIGETTGRSLAVIKADQHEIGDLGLVAAKSRSNQP
TMFKPKPLTVRGVHEGLLAIAKVQGHGSQDKKISGIKKLLSAADAATAGKGAKGIDIKQN
KGGPSEAKFLIRFLEGKLRLGLAEKTVLVALAQAVVAHEAELEGGKSASAERLAQGESLL
KQVYSELPAYEVIIPAMLKEGIFNLPDVCKLQPGVPLKPMLAKPTKSITEVLNRFEGKEF
TCEYKYDGERAQIHYVSPDSIHQFPNAATTLQKDAKGLSSIFSRNSEDLSKKYPDILAKL
DTWIKPGVSSFVLDCETVAWDMANKKVLPFQQLMTRKRKDVKAEDVKVKVCVFAFDLLFL
NGEPTVKKSLRERRQLLHEAFQPTEGEFAFAQHSNTNELDEIQSLLEDSVKASCEGLMVK
MLDTEESGYEPSKRSRNWLKVKKDYLQGLGDSLDLVVLGAYFGRGKRTSVYGAFLLAAYN
ASKQSFETICNIGTGFSEALLEELHKELSPLVIDRPKPFYEHSTVPKDQPDVWFEPRLVW
EVKAADLTLSPRYKAASEEVVGTSGADGKGISLRFPRYIKARDDKKPEQATTTRAVAEMY
RRQEAVAKETAGKGGVDDDFEY
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgccggaaaagactggcacgaggcaagctacgctggggaaattcttcgggtctgacaga
caaaattccacagatgccgcgaagcgtcaaaccacactgtccttctccaatgggaacagg
agaaaagaaaaaaccacgagtgacaagcccgtgaaggagccgaaagaaagtgagggccaa
gatgacatggacttgaatggagacgcaagcgcagccaacaatgggtcgacatcgcctaca
aaaggtgtcaagagagaccagtctgcggaagcagaagaaagcgatgattcagatatccag
cccgccaccaagaaacggaggaagaacgccaaaagcccccgtcccaggaagtctgccaaa
gaaatcgtcgccgagcgtccatcgtcgcctaaggtatcgaaaaaggcctctggtgaagtg
acacccgtggaagaagacgccgatgaaccagcagaagacccctccgccagcgaagaggat
gaagatgagaaacccgaaatcaagaagaagcagattgagaaggttcaggcaacactaaaa
agcaccggcaacgatccgtatcctgactggaaggcgggtgagcctgttccatacgccgct
ctctgcacgacattttctcttatagaaatgacgaccaagcgtttgataattttggcgcat
gcttcgcttttcctgcgacaggtccttagactcacaccggaggatttattaccaactgtt
cagctgatgattaacaagttggcagctgactattcgggtatcgaactgggcattggagag
tctttgatcatgaaagcaattggagaaaccaccggacgaagtttggccgtgatcaaagct
gatcagcatgaaattggcgatctgggcctggttgcagcaaaaagccgatcaaaccagcct
accatgttcaaaccaaaaccgctgaccgtcaggggcgtccacgaaggcctgctcgcgatt
gccaaggttcaaggccatggatctcaggacaagaagatttcaggtatcaaaaaacttttg
tcagcagctgatgccgccacggcaggcaagggagccaagggaattgatatcaagcagaat
aaaggaggcccaagtgaagcaaaattcctcatcagatttcttgaaggaaagctgagactc
ggtctagctgagaagacggttctcgttgctcttgcccaagcagtggttgcccatgaagca
gaactcgaaggcggaaagtctgccagcgccgaacgccttgcgcagggagagtctctgcta
aagcaggtgtatagcgaacttccagcttatgaagtcattattcccgctatgttgaaagag
ggtattttcaatctaccagatgtctgcaagctacagcctggtgtcccgttgaagcccatg
ttggctaagccaaccaagtccatcactgaagtcctaaacagattcgagggtaaagagttc
acctgtgaatataaatatgatggtgaacgagctcaaatccactacgtctcaccggattca
attcatcaatttcctaacgcagccaccactctccagaaagatgccaagggcctcagttca
atcttctcgcgaaattcagaagatctatccaagaaataccccgatatcttggcaaagctt
gatacctggattaagccaggtgtttctagttttgttctcgactgtgaaacagttgcctgg
gatatggcaaacaagaaggtgcttccatttcagcaattgatgacccgaaagcgaaaagac
gtcaaggccgaagatgtcaaagtcaaagtctgtgtctttgcattcgatctgttgttcttg
aatggcgaaccaacagtgaaaaagtctcttcgtgagcgtcgccagctcctgcatgaggct
ttccagcccactgagggcgagttcgcatttgctcaacattccaacaccaacgagcttgac
gagattcaaagtctgttagaggacagtgtgaaagcatcttgtgagggtctcatggtcaag
atgcttgacacggaagaaagtggctacgaacccagtaaacgaagtcgcaattggctcaag
gtcaagaaagattatcttcaaggtcttggtgactccctcgacctcgtcgtcttgggagca
tactttggccgaggaaagagaacttcagtctacggtgcgttcttattagcagcatacaat
gctagcaagcaaagctttgaaacaatctgcaatatcggtaccggtttctctgaagcctta
ctcgaagagcttcacaaagaactctcccctcttgtcatcgaccgccctaaacctttctat
gagcactccactgtccccaaagaccaaccagatgtctggttcgaacctcgtctagtctgg
gaagtcaaagctgcagatcttaccttgagtccacgctacaaggccgcctcggaggaagtt
gttggcacatccggcgcagatggcaagggtatctcgctgcgtttccctcgatatatcaaa
gcacgtgatgacaagaagcctgagcaggcgactaccactcgagctgtggcggagatgtac
cgtcgtcaagaggctgtagccaaggagaccgcaggaaagggaggtgttgacgatgatttt
gagtattag

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