Talaromyces marneffei: EYB26_005900
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Entry
EYB26_005900 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EYB26_005900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_005900
Enzymes [BR:
tmf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EYB26_005900
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EYB26_005900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Prismane
Motif
Other DBs
NCBI-GeneID:
79165873
NCBI-ProteinID:
XP_054121152
LinkDB
All DBs
Position
4:complement(join(2377947..2378817,2378870..2379004,2379057..2379176,2379232..2379268,2379319..2379844))
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AA seq
562 aa
AA seq
DB search
MPKRNPRPNSGAVASPAQDNKKRALGETQESILSPRRSKRTKSIVESPISKPSTVPASQT
PRKPGRQVSTNSKSKGTAAEIKEEDQTEADDLKSSIQIKKQKVSIAEQKLNKGIKKEVKI
EEEEEEEKEKEKEIISTKLTKKRKTKAEKETEMLPLAARTKGLQMFVGAHVSAATGVQNS
ILNSVHIGGNAFALFLKSQRKWDNPPLQDEHKEQFLKFCRDYEYDAAKYILPHGSYLVNL
AQEDETKAKQAYDSFLDDLKRCEKLGIRLYNFHPGAAGQSTVESAISRLAKSLTKALAAT
ETVIPVLETMCGHGTTLGGDLSELGAVISQIPEQYHSRIGVCVDTCHSFSYGYDLVAPEG
FKAFMQEFDEKIGLKFLRALHLNDSKAPKGSKRDLHANIGTGFLGLRAFHNVMNEERFQG
LPMILETPIDRPASTPNNESSKGKGSRKPKKEEDEDSCGSNHEIDSPKAKKARKAPASHT
KLVEDKNVWAREIKLLESLIGMDPESAEFHTLAAQLSEDGKAERQKHQQQYERKLETEAK
KKQKELEKGQKSLDSMFKKKKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgaaacccgcgtccaaattccggtgccgtcgcctcgcccgctcaagataat
aaaaaacgagccttgggtgagacccaggagagtatactgtcaccgagacgatccaaacgc
acgaaatccatcgtcgagagtcctatatcgaagccgtccaccgtgcccgcaagtcagaca
cctagaaaacccggcaggcaggttagcacaaacagcaagtcaaaaggaacggctgcagaa
atcaaagaggaggaccagacggaagctgatgatctaaaatcctcgatccaaattaaaaag
cagaaggtttccattgcagagcaaaaattgaataaagggatcaagaaggaggtcaagatt
gaggaggaagaagaagaagaaaaagaaaaagaaaaagaaataatctccacaaagcttacc
aaaaagcgaaagacgaaagctgagaaagaaaccgagatgttaccacttgccgccaggacc
aaggggctacagatgtttgtaggagctcacgttagcgccgccacgggagtacagaattcc
atcctgaacagtgtgcatataggaggaaatgccttcgccttattcttaaaatcccagaga
aaatgggacaatccaccgctccaagatgaacataaggagcaatttctgaagttctgtcgt
gactacgaatatgacgcagcaaaatatatcctgccacatggctcgtacctcgtgaacttg
gcacaagaagacgagacgaaagcgaaacaagcctacgactcctttcttgatgatttaaaa
agatgcgagaagcttggtatcaggctctataacttccatccaggagcggcgggccaaagt
acggtagagtcggctatttcaagacttgctaaatcattaacgaaagctttggctgcaact
gaaacggtcatccctgtattagagaccatgtgcggtcatggaacgactctaggcggtgat
ctctccgagctaggagccgtaatctcacagattccagaacagtaccactcacgtattgga
gtatgcgtcgatacgtgccacagcttctcgtatggctatgatttggtagctcccgaagga
tttaaggcctttatgcaagaattcgacgagaagattggattaaaattcttaagagcacta
catctcaatgactcaaaggcgccgaaaggtagcaaacgtgaccttcacgccaatattggc
actggctttttgggccttcgtgctttccacaatgtgatgaacgaggaacgctttcaggga
cttccaatgatccttgaaactcctattgatcgacccgcctcaactcccaacaacgaatca
agcaaaggcaagggctctcgcaaacccaagaaggaagaagatgaagactcatgtggtagc
aaccatgagatagactcccccaaagccaaaaaggcgcgcaaagcccctgcatctcatacc
aaactcgtcgaggataagaatgtatgggcccgagaaatcaagttactcgagtccttaatc
ggcatggatcctgaaagcgcggagttccataccttagcggctcaattatccgaagatgga
aaggcagagagacaaaaacatcagcagcagtatgagcggaagcttgagacggaggctaaa
aagaagcagaaggaacttgagaaggggcagaagagtttggatagtatgtttaagaagaaa
aaggagtag
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