Talaromyces marneffei: EYB26_006026
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Entry
EYB26_006026 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EYB26_006026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_006026
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
EYB26_006026
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
HDA2-3
Motif
Other DBs
NCBI-GeneID:
79165999
NCBI-ProteinID:
XP_054121278
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Position
4:join(2731156..2731475,2731527..2734371)
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AA seq
1054 aa
AA seq
DB search
MPFKPFKPPLIQKYASNDASQNATDNSSVPPPSKRPRLSVDEDEIASTKAKPVVVDLTSP
DAGIVRKVSVGRPPLVNVKNTPGEIETSTVDNGSISNDVEAYYNVLWRKFTAKKHKTWDG
DGILVIRGGYGYLRDVSGREMGRIVINKLLECGTSLTIGGKDVEIESAISKKDYLSGKEF
LNSARKPSSSPPSRVKSTSFASRKTAHSNASTSNEGPLHALLKTNTVNPQVGPPKLSVKH
LNAAALRGNAVSTAFKNPLKETSSSTPQPSIKAIPRHDPNAPGALVMKRPKTAPKGQTIV
DVVVDPFLSKHLREHQREGVKFLYECVMGLRDYNGEGAILADEMGLGKTLQTITLLWTLL
KQNPIYEASPVIKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKKLTDFTMGKA
YNIMIVGYEKLRTVQDGLLKGHGVDIVIADEGHRLKTVQNKSGQAIQALNTAKRIILSGT
PIQNDLSEFFAAVDLVNPGILGTYRNFMKEFEGPIVRSQQPEATMRDIEKGEARGEELRE
LTSMFILRRTADVLSKYLPPKTEYVILCNPTSVQASIYRHVLGSPIFQSALGNTEGAFSL
LTVLKKLCNSPSLLTAKAGDEPPNATMEALLSTLTPSLRRQFSPSSSGKIRVLDQLLHNL
QTTTSEKIVLVSNYTSTLNLLGILLTSLSLPFLRLDGSTPSAKRQSLVDDFNTAPASKCF
AFLLSAKAGGTGLNLTGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGAL
EEKIWQRQVTKIGLADSVMESKSSNMAQFSREELKDLFRLYEGKSCQTHELLNCKCGGKG
IPPPPAVPAPIHISLLDEDEEDDKSELLESPETTPESSRSISPFWKDEELSDSEDIDLPD
LHTLMKASKVNIEEQEDQIRRGKHALQRKSKQEKLNTKAIAKPTSPASRILSSRKRKHRK
DEDDVDEDEAGSSEQSKIQRFLAEYAHIDPAAFQSSGDNDKEEVGDLKNHIHDPILQALL
DDEDHGIGFLFQKTAFPASSSPAPPGGGVKETSS
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaaaccgttcaagcctcctcttatacaaaagtatgcatcgaatgacgcctca
caaaacgctactgataactccagcgttccaccgccgtccaaacgaccgcgtctcagcgtc
gacgaagatgagattgcgagcaccaaggcgaaaccggtggtcgtcgatttgacttcacca
gatgctggtatagtaaggaaggtctctgtaggaagacctccgttggtcaacgtcaagaat
acgccgggcgagatagagacgtctacggtggataatggcagtattagcaacgatgttgag
gcttactacaatgttctctggcgcaagttcacagcaaaaaagcacaagacctgggatggc
gacggaattctggtaatccggggagggtatgggtatcttcgagatgtgtccggtcgcgaa
atgggcagaattgtgatcaacaaacttcttgaatgtggcacaagcttgacaataggagga
aaggatgttgaaatcgagtctgccatctcgaagaaagactatttgtcggggaaggagttt
ttgaatagcgcgaggaagccttcctcttcacctccatctcgggtcaaatcaacgtccttc
gcttctagaaaaactgcacattcgaatgcgtctacgagcaatgaaggaccattacacgct
ttgctgaaaacgaatactgtgaacccccaggtcggaccgccaaagttgtcagtaaaacac
ctcaacgccgcggccctaagaggcaatgctgtcagtacggctttcaagaatccattgaaa
gaaacttcaagctcaacacctcaaccaagtattaaagccattcctcgtcatgatcccaac
gcccccggagctttagttatgaagcgtccgaagactgcaccaaaaggtcagactatcgtt
gacgttgtcgtcgatcccttcttaagcaagcatctccgtgagcatcagcgagagggtgtc
aaattcttatatgaatgcgtcatggggctcagggattataatggcgaaggtgctatattg
gctgacgaaatgggacttggcaaaactcttcagacaataacattgttatggactctacta
aaacaaaaccccatatatgaagcatcacctgtgataaagaaagcattgattgtttgtccg
gtcacgctgatcaataactggaggaaagagtttcgcaaatggcttggcaatgagcggatt
ggtgttttcgtctttgatgataaacgcaagaaactgactgatttcacaatgggaaaggct
tataacatcatgatcgtcggttatgagaagcttcgtaccgtacaagacggactcctcaag
ggacatggggtcgatatcgtgatagcagatgaaggacatcgattgaaaaccgtgcagaac
aaaagcggtcaggcgattcaagccttgaacacagcaaaacgaatcattctttcaggcacg
ccaatacaaaacgacctgagcgagttttttgcagcagtagatcttgtgaaccctggaata
ctcggtacctatagaaacttcatgaaggaatttgaagggcctattgttcgcagccagcaa
cctgaggcaacgatgagagatatcgaaaagggcgaggcaagaggcgaggagctccgagaa
ctcacatcaatgttcatcctgcgaaggacggcggatgtcctatccaagtaccttcctccc
aaaacggaatacgtgatactttgcaaccctacctcagttcaagcaagtatctaccgtcac
gttcttgggtctccgattttccagagtgcattaggaaacacggaaggagcgttcagcctc
cttactgttctgaaaaaactctgcaatagcccgtccttgcttactgcaaaggctggcgat
gagccgccaaatgccactatggaagcactactatctactttgacaccaagcctacgtcgc
cagttctcaccttcgtcgagtggaaagatcagggtattggatcagttgcttcacaaccta
caaacaaccacatcggagaaaattgtacttgtctctaactacacctcgacactcaacttg
cttggcatattactcacttctctttctctgccgtttctgcgactggatggctccacaccc
tcggccaaacgtcaatcactagtggatgacttcaacacagctcccgcaagtaaatgtttc
gcattccttctctccgccaaagccggaggcacaggactaaatcttaccggtgccagtcgc
ctcgttctctttgacgtagattggaatccggccaccgatctccaggccatggcccgaatc
caccgagacggacaaaaacggcactgttacatctatcgaatcatgctcaaaggggctcta
gaagagaaaatatggcaacgtcaagtcaccaaaatcggcttagcggatagtgtcatggaa
tcgaagtccagcaacatggcccagttctcgcgggaagaactcaaggatctgttccgtcta
tatgaaggcaagagctgccaaacccatgaactgctgaattgcaaatgcggtgggaagggc
atccctccaccgccagctgttcctgctccgatccacatatcgctattagatgaagacgag
gaagatgataagagcgaactgctcgaatctcccgaaacaacaccagaaagctcgcgaagt
atatcccccttctggaaagatgaggaattatcagacagcgaagacatcgacctccccgac
ctgcacacactcatgaaagcgtcaaaggtaaacatcgaggaacaagaagatcaaatccga
cgtggaaaacatgctctccagcgaaaatccaaacaggagaaattgaataccaaggcaatt
gcaaaaccaacatcgccagcgtcaagaatactctctagccgcaagagaaaacatagaaaa
gatgaggatgatgtggacgaagatgaagcgggatcaagcgaacaaagcaaaatccagcgc
ttcctcgctgagtacgcgcacattgatcctgctgctttccagtctagtggtgataatgat
aaggaggaagtcggtgatttaaaaaaccacattcacgacccgattttacaagctctacta
gacgatgaagatcatgggataggattcttgtttcagaagacggcttttccagcttcgtct
agtcctgcaccgcccggcggtggtgtgaaggagacttcgtcttga
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