KEGG   Talaromyces marneffei: EYB26_006125
Entry
EYB26_006125      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tmf  Talaromyces marneffei
Pathway
tmf03020  RNA polymerase
tmf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EYB26_006125
  09124 Replication and repair
   03420 Nucleotide excision repair
    EYB26_006125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmf03021]
    EYB26_006125
   03400 DNA repair and recombination proteins [BR:tmf03400]
    EYB26_006125
Transcription machinery [BR:tmf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     EYB26_006125
  RNA polymerase III system
   RNA polymerase III
     EYB26_006125
  RNA polymerase I system
   RNA polymerase I
     EYB26_006125
DNA repair and recombination proteins [BR:tmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EYB26_006125
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1 Nup54 Sld3_N
Other DBs
NCBI-GeneID: 79166098
NCBI-ProteinID: XP_054121376
LinkDB
Position
4:join(3022553..3022651,3022727..3022809,3022864..3023392)
AA seq 236 aa
MEDDTSPSSQEARNEMARLWRTWRTVHEMLRDRGYEISEEELKIDLQDFTNKFSDSNGFP
SRERMTIAAIPSEAMKAKYTPLKKRPTDPDPVPDCGQIFVQFCEDTTGVGAKQVRQFNHL
VDEGNYHSGIFITRTAISPSAVRLLNSAIGHICEHFQESDLLVNITHHELVPKHVLLSAE
EKARLLERYRLKESQLPRIQVSDPVARYLGLRRGQVVKIIRKSETAGRYASYRWVI
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaggacgatacttcaccaagcagccaggaagctagaaatgagatggccagactatgg
cgcacatggcgcacagtccatgagatgcttcgagatcggggatatgaaatatctgaagaa
gaactgaaaatcgatcttcaagactttacaaataaattcagtgactcaaatgggttccct
agtcgcgagagaatgacaatcgccgccattccctccgaagctatgaaagccaaatacacc
cctctcaagaaacgcccgaccgaccccgacccagtccccgactgcggccaaatattcgtc
cagttctgcgaagacacaaccggtgtaggcgccaaacaagtgcgccaattcaaccacctc
gtcgacgaaggaaactaccactccggcatattcatcactcgaacagccatttccccctcc
gccgttcgtctcctgaacagcgctataggccatatctgcgaacattttcaagaatcggat
ctgttggttaatattacgcaccatgaacttgtgcccaaacatgtgcttttgagtgcagag
gagaaagcgcggttattggagcgctatcgtcttaaggaatcgcagcttccgagaattcag
gtttcggatcccgttgcgcgctatctgggattgaggaggggtcaggttgtgaagattatc
cgaaagagtgagacagctggtcggtatgcaagttatcgctgggttatttga

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