Talaromyces marneffei: EYB26_006994
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Entry
EYB26_006994 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tmf
Talaromyces marneffei
Pathway
tmf03022
Basal transcription factors
tmf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYB26_006994
09124 Replication and repair
03420 Nucleotide excision repair
EYB26_006994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_006994
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_006994
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EYB26_006994
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EYB26_006994
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
79166967
NCBI-ProteinID:
XP_054122241
LinkDB
All DBs
Position
5:complement(join(1869157..1869772,1869836..1869964,1870025..1870360,1870419..1870636))
Genome browser
AA seq
432 aa
AA seq
DB search
MADSDEEYVGSGSEDEIDAHIVSSGAGTRSTRKKQRGGATFEVSRTWESVVEGADGTISS
TVEGLLEAGKRKRLLRDTTPLQRGIIRHLILVLDLSQSMAEKDIRPTRYLLALRYAQEFV
IEFFEQNPISQLGVIGMRDGLAVRISDMSGNPTDHITAIHALRPDDPKGLPSLQNALEMA
RGALFHTPSHGTREVLIVFGSLLSSDPGDIHQTLKSLIADKIRVGIVGVYGVALNEQHFR
ELMMDVTIPPAAYSYRKSSSALLMMGFPSRTVESFPSLCACHSKPSCGGYLCSRCGNKVC
GLPAECPSCGLTLILSTHLARSYHHLFPLINWVEVPWKRALRSTNCYACGIQFPTVPPAD
QWGAFENQAKGMSVSSRYECSACHNHFCIDCDLFAHEIVHNCPGCQSTNFMKPHHSRDAA
SPPVERMEGITS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcggatgaggaatatgtaggttctggatcggaagatgagatcgatgcccat
atagtatcgagtggtgctggaacgcgctctactcggaagaagcagcgcgggggtgccact
ttcgaggtctcaaggacctgggaatccgtcgttgagggcgcggatggtacgatcagttcg
acggtagagggactattagaggctgggaagagaaagaggttactgcgagataccacacct
ttacaacgaggaatcattcgtcatctcatcctagtccttgacctttctcagtctatggcg
gaaaaagacattcggccaacacgttatttattagctctgagatacgcccaagagttcgtc
atcgagttcttcgaacagaatcccatctcacaacttggagttattggcatgcgcgatggc
ctagccgtacgaataagcgacatgagcggaaaccctacagatcacatcactgcaattcac
gcgttgagaccagacgacccgaagggacttcctagcttgcaaaatgctttggagatggcg
agaggtgcactatttcatacgcccagtcatggtacccgagaagtattaatagtctttgga
tcacttctgtcctcggatccgggagacattcaccagaccttaaagtcccttatcgcggac
aaaatccgcgtgggcatagttggtgtttacggcgtggctcttaacgagcaacatttcagg
gaactgatgatggacgttacaatcccgccagcagcatattcctacaggaaatcgagtagt
gctctattgatgatgggattcccgtcccggacagtggaatcttttccatctttatgtgcc
tgccactcaaaaccgtcttgtggcgggtatctgtgctcacgatgtgggaataaagtctgc
ggtctcccagcggaatgtccttcttgcggcctcacattgattctctcgacacatttagcc
cgatcttatcatcatttgtttcccctcatcaactgggttgaagtaccctggaaacgggca
ttacgcagcaccaattgctatgcctgcggcatccaattcccaactgtacctcccgcggat
caatggggagcttttgagaaccaagccaaggggatgagtgtcagcagccgctacgagtgc
tcggcttgccataatcatttctgtatagactgtgacctatttgctcatgaaatcgttcat
aattgtcccggttgtcagagcaccaacttcatgaagcctcatcacagtcgagatgcagcg
tcaccgccagtggagaggatggagggaatcacaagttga
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