Talaromyces marneffei: EYB26_007708
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Entry
EYB26_007708 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
tmf
Talaromyces marneffei
Pathway
tmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EYB26_007708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_007708
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_007708
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EYB26_007708
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EYB26_007708
U7-dependent histone pre-mRNA processing factors
EYB26_007708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
79167681
NCBI-ProteinID:
XP_054122944
LinkDB
All DBs
Position
6:join(564224..564555,564675..564840,564901..565031,565081..565284,565340..565688,565742..566586,566643..566713,566780..566889)
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AA seq
735 aa
AA seq
DB search
MAQVDLKEQLTQLEAARNLVLSDAALYPQVLQGILPIIGANARLDLRRWGADFLAETFAN
TTLPSDQKEQLAGTVLPTLNEYLGNDAQDVAVIKSTVQTASSLYPFVFRHIIHHPNDTAM
WDQITAIKHNILQRMDTAPHPVRVCCIKFVQKVVHTQTPGPIADPRRPERNETSIAIVPR
THPLLSIPNLEAEASGLLDRLLTVLQDDSDDAILVNATINCLGILIRSRPTIANKILETL
LNFNPIKIDHGPLTPTMRVKIKSMERTTRAVLINLLKRNPNHPLAGKMQQHMERLAQNCI
EAFDASSRKRALPVEPIDGLDNAKRAKLSVETPPLIKIPPLPDGPISYSQLYTLTEDIGL
SSFDVKQLPPDLIVKIAVAVLGRVDPNALAQATEGIRGRYQTLIARQAQQAQQAQAPPEE
EDDEYEPEYQPMDIPSAEVQDIAAPVFDLEPELGPFQLSRPPPLTENEANEIGRAAADRV
FEMMIATPFKAATKPATASGAAAASSPSSSDRKGFARLAGGSLDTKEAWITMLVRMATRA
PAKLEAAAGEIQTSDGRPTISNYIRELLYRHILEDFRSRINIGIMWLNEEWYNDRMQMEA
AASQRGKSEEISVPLHYDSWVLRLLGGILPYLDARDVKILIRFLSEIPEVTLPIIGRVQT
LAMDPERINLCVQALHYLVMFRPPSREICLNALEEIYNTYEEARPAASKVLSKWRPEVIA
AQQPRELPSSTNGVQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtcgacctaaaagagcaactaacccagctcgaagcagctcgcaacctcgtc
ctatccgatgccgcactctacccccaagtcctacagggcattttgcctatcatcggcgca
aatgcgcgattagaccttcgacgatggggtgcagattttctcgcagagaccttcgcaaat
acaacgctaccttcggatcaaaaggaacaactcgctggtaccgtgttacctacgttgaac
gagtacctagggaatgatgcgcaggatgtggcggtaattaagagtacggtgcagacggcg
tcgagtctgtatccgtttgttttcaggcatataatccaccatccaaacgacacagctatg
tgggatcaaattacagcaataaaacataatatactccagagaatggacaccgcgccacat
ccggtcagggtatgctgtatcaaatttgtgcagaaggtcgttcatacccagacgccgggg
ccgatcgctgatccacgacgacctgaaagaaacgagacttctattgcaattgtgcctagg
actcatccactgctttcgataccgaatcttgaagctgaagcgtccgggttgttagatcga
cttcttactgttcttcaagacgattccgatgatgcaatccttgtgaacgccacaatcaac
tgtctggggattttgattcgctctcgtcctacaatcgctaataagatcctggaaacgtta
ttgaatttcaaccctatcaaaatagatcacgggcctttgacacctactatgcgtgtcaag
atcaagtcaatggagaggacgacacgcgctgtattaatcaatctactgaaaagaaaccct
aatcaccccctagctggaaagatgcagcaacacatggaacgactggcacaaaactgcata
gaagcattcgatgcatcgtcccggaaacgcgcactaccagttgagccaatagatggtctc
gataatgctaagagagcgaaactgagtgtcgaaactcctcctctaatcaagattcctcct
cttcccgatggacctatcagctattctcaactgtatactctcacagaagatatcggactg
tcctctttcgacgtgaagcagttgccccctgatttaattgtcaagattgctgtagcggta
ctaggacgtgttgatcccaatgctcttgctcaagcaactgagggtatccgaggtcggtat
caaacactaatcgcacgacaagcccaacaagcccaacaagcccaggcaccacccgaagaa
gaagacgacgaatacgaacccgaatatcaaccaatggatatcccctcggccgaagtccag
gatatcgcggcccctgtatttgacttggagcctgaactaggtccattccaactcagccgg
cctccacccctgacagagaacgaagcaaatgaaattggccgcgctgccgctgatcgtgtg
tttgagatgatgatagcaactcccttcaaagcagctactaaacctgccaccgccagcggg
gcagcagcagcttcatctccgtcctcctcagatcgaaaaggtttcgcgcgtcttgccggt
ggttccctcgacaccaaggaggcatggataacaatgctagtccgcatggcgacacgcgca
cccgcaaaactggaagcagccgccggcgaaatccagacctcagacggtcgacccacaata
tcaaactacatccgcgaactgctttaccggcacatcctcgaagattttaggtcacgaatc
aatatcggcatcatgtggctcaatgaagaatggtacaatgaccgcatgcaaatggaagct
gcagcatcacaacgtgggaaaagcgaggaaatctccgtaccgctgcactacgattcatgg
gttttaaggctgttgggcggtatattgccgtatcttgatgcgcgggatgtcaagatcttg
atcaggtttttgagtgagattccggaggttacgttgccgattattgggcgtgtgcagact
ttggcaatggatccggaacgcatcaatttatgtgttcaggctttacattatttggtaatg
ttcagaccaccgtcgagagagatatgtctcaatgccttggaggagatctacaatacctac
gaagaagcacgcccagcagccagcaaagtcctctcgaaatggcggcctgaagttattgcg
gcacaacaacctcgagagctgcctagcagtactaatggtgtgcaataa
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