Talaromyces marneffei: EYB26_007727
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Entry
EYB26_007727 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tmf
Talaromyces marneffei
Pathway
tmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EYB26_007727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmf03041
]
EYB26_007727
Spliceosome [BR:
tmf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EYB26_007727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Tricorn_2nd
eIF2A
Beta-prop_WDR11_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
79167700
NCBI-ProteinID:
XP_054122963
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Position
6:join(613741..613816,613886..615390)
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AA seq
526 aa
AA seq
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MMHPSRQAYVEEAEDTDMGISLADLPTDRDYDLPAAGAGVAPERASALLSQFERKRRAAA
IIVPTDDNRVRLRLRELGEPITLFGEGPADRRDRLREILTTLQEQQLAGSEDVEMREGTL
TETDVAEEEEGEQQEEFYTEGSQELLDARKKIALYSLPRAKARVAWQLEQSKIPLRTQVK
FRKSVKEKLQGFDLYGSQIAADRPVSITRFAPDGETIATGNWAGGIKLLSVPNLEEKFSV
KGHSDRVTGLSWFPGATLSTSNVSESSLNLASGGGEGNINLWSLDKKEPLATLSGHTERI
CRVEFHPSGKYLASASYDTTWRLWDVETTTELLLQEGHSKEVYAVSFNSDGSLLASGGLD
SYGRIWDLRTGRTVMVLQGHIREIYGVDWGVDGYRVLTGSGDGWVKCWDLRKVDCTASIG
AHKSVVSDVRWYKGGDSAQSYLPTTTAQNGGGDAMETDAAQPRMGGTFFVSSGFDRNVNV
FSADDWSLVKSLSGHSDKVLSVDISPDAKWIASSSHDRTVKLWGIE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccatcgaggcaggcgtacgtggaggaagcggaggacactgacatgggcatc
agtctcgcggatctccccaccgaccgcgattatgacctccccgccgccggcgctggcgtc
gcacccgagcgagcgtcagctctactctcccaattcgaacgcaaacgccgcgcagccgcc
atcatagtgcctacagacgataatcgagtacgcctacgcctacgcgaacttggagaacca
atcaccctcttcggcgaagggccggctgatcgtcgagaccgattacgagagatactcaca
acgctacaagaacaacaactggccggcagcgaagatgttgagatgcgcgaggggactctt
acggagaccgatgttgcggaggaagaagaaggggaacagcaggaagaattttatacggag
ggttcgcaagaattattagatgcaaggaagaagattgctttatattctttgcccagggca
aaggcgcgtgtggcgtggcagttggagcagtctaagataccccttcgaacgcaggttaag
tttcgcaaatctgtgaaggagaagttgcaagggtttgatctatatgggtctcagatcgcg
gccgatagacccgttagtattacgcgatttgcgccggatggtgagacgattgcgacgggg
aattgggcgggaggaattaaattactcagcgttcccaacttggaggagaaattcagtgtc
aagggacatagtgatcgagtcactggactatcgtggtttccgggtgcgacattatcgacg
tcaaatgtatcagagtcttcgctgaatttggcgtccggaggaggagagggaaatattaat
ttgtggtcgttggataagaaggagccactggcgacgttgtcaggacatacggaacgtatt
tgtcgagtggagtttcatccgtcggggaagtatttggcttctgcgtcgtatgatacgacg
tggaggttatgggatgttgagacgacgacggagctattgttgcaggagggtcattctaag
gaagtctatgctgtttctttcaattcggatgggtcactgctggccagtggaggcttggac
agttacggaagaatatgggacttgcgaactggccgaacggtcatggtgttgcaaggccat
attcgagaaatctatggcgtagactggggtgttgatggctatcgtgttctcacaggttca
ggagacggatgggtgaaatgctgggacttacgcaaagtcgactgcaccgctagcatcgga
gcacacaagagtgtcgtctcggatgttcggtggtataaaggcggcgattcagcgcagtcg
tatctaccaactacgacggcgcaaaacggaggtggggatgccatggaaacggatgcggca
cagccgcgaatggggggcacattttttgtcagctctggatttgatcgaaatgtcaacgtg
tttagcgccgatgactggtcgttggtgaagtcgttgagcggtcattcggataaagtgctg
agtgtggatatcagtcctgatgcgaaatggattgcgagctcgagtcatgatcgtacagtc
aaactttggggtattgaatag
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