Talaromyces marneffei: EYB26_007984
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Entry
EYB26_007984 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K15172
transcription elongation factor SPT5
Organism
tmf
Talaromyces marneffei
Pathway
tmf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EYB26_007984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_007984
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_007984
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EYB26_007984
RNA polymerase I system
EYB26_007984
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
EYB26_007984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOWx_SPT5
Spt5_N
KOW4_SPT5
CTD
KOW5_SPT5
KOW2_Spt5
KOW
KOW1_SPT5
Motif
Other DBs
NCBI-GeneID:
79167957
NCBI-ProteinID:
XP_054123218
LinkDB
All DBs
Position
6:join(1302583..1302861,1302924..1304407,1304461..1305030,1305086..1305246,1305299..1305867)
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AA seq
1020 aa
AA seq
DB search
MSNNVLNQDFGSDEEDDDFNPAPAVDSDEEGVRPDRRRGREVEVDEDAEDDNEGAEGEGR
GDEDEGDEDEAEDEEDEEEDEDEEDDDDEDAVSGRPKKRRRRGGVNAFIEEEAGVDDDDE
EAEDEEDDMGDVFGAEAHPDDLDALPLGAELDDRRHRQLDRQRELEAHMDAEKQAAALKE
RYGRNRMAATDSVVVPKRLLLPSVDDPSIWGVRCKPGKERDVVLNIQKRIEQRPPGTRHG
LKIISAFERGKTMTGYVYIEARRQAEVMEALDGLLDVYPKTKMVLVPVKEMPDLLRVKKS
EELNPGDWVRIKRGKYQGDLAQIEEVETNGLEVTVRLVPRLDYGLNEDLSAPADVKRKRF
GAANNTAARPPQRLFSEAEASKKHGRHLVGTSNLSGKSWNYMGDTYVDGFLVKEMKIQHL
ITTNVNPRLEEVTMFARGSEDGTANIDLASLANTLKNTVAEDAYRPGDQVEVYKGEQQGI
IGKTVATRGDIITLEVTEGDMKGQVIDAPIKTLRKRFREGDHVKVIGGSRYQDELGMVVQ
VKGDSVTILSDMSMEEITVFSKDLRLSTESGVDGKLGTFDVHDLVQLDATTVACIIQVDR
ESLRVIDQNGSVRNVLPSRIASKIAKRKDAVATDRNGAEIRHGDTVREMYGEQRSGVIMH
IHRSFLFLHNKAQAENTGVIVVRTSNVVTVSAKGGRATGPDLSRMNPAIMQRPPQGGAMP
PPRAGRDRLIGKTVGITKGSYKGLIGIVRETTEDLVRVELHTKGTKVMVPRTGVVVKDPI
TGQTIDMGRGGRPRVPGGPGGPPQPNWAGSRTPMASLDSRTPAWGGSLSSRTPAWGGSAA
SGSRTPAWKADGSRTAYGGAMGGGRTPAWNSGARTPYDSGSGGSGGGFDAFAAGSRTPAW
GAATGSRTPAWTANSNSAPSAAANTGRYDAPTPGGDYSAPTPGAYPTAPTPGASGTASTP
RWAESAPTPGALNAPTPGAGGGGGGLTVGGRLPYDAPTPAMAATPGAMGDDNPTYLDDSE
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaacgtgctgaaccaggatttcggctccgatgaggaggacgacgacttcaac
ccagccccagctgtcgactcggacgaggaaggcgtcagacccgatcgcagacgaggtcgg
gaggtcgaggtggatgaagatgctgaggatgacaatgaaggagctgaaggcgaaggaaga
ggcgatgaagatgaaggagacgaggatgaggcggaagacgaagaggatgaagaggaggac
gaggatgaagaagatgatgatgatgaagatgctgtttcaggccgacctaaaaagcgcagg
agacgaggcggtgtcaatgcttttattgaagaagaagctggcgttgatgacgacgatgaa
gaagcagaggatgaagaagatgacatgggcgatgtatttggcgccgaagcccatcccgac
gatctcgatgcgctccccctcggcgctgagctagacgaccgcagacacagacaactcgat
cgccaacgcgagcttgaagctcatatggacgctgagaagcaggcagctgcactcaaagaa
cgatatgggcgcaaccgtatggccgccacagactcggtcgttgttcccaagagattgctt
cttcccagtgtcgacgatccaagtatctggggtgttcgctgcaagccgggaaaagagaga
gatgtggtgctcaatattcagaagcgtatcgaacagcgacctcccggtacccgtcatgga
ttgaagattatatcagcctttgagcgtggaaagacaatgactggttacgtctacattgaa
gcgagaagacaggccgaggtcatggaagctctcgacggtcttctcgatgtctatcctaag
accaagatggtcttggtaccggtcaaggagatgcctgatcttctacgagtcaagaagtcc
gaagagctcaaccccggtgactgggtgcgaatcaagcgtggaaaataccaaggcgatctt
gctcaaattgaagaagtcgaaacaaacggtttggaagtcactgttcgcctggttcctcgt
ctcgactacggattgaatgaagacctttctgcacctgccgatgtgaagagaaagagattc
ggcgccgcaaacaacacagccgctcgaccacctcaacgtctgtttagtgaggcagaagcc
agtaagaagcatggcagacatctagtaggaacatccaatttgagcggaaagtcttggaat
tacatgggcgacacctacgtcgatggcttcttagtcaaggagatgaagattcagcatttg
atcacgacaaacgtcaaccctcgcctagaggaagtcaccatgtttgctcggggctctgag
gacggtactgcaaatatcgacctggcatcattggccaacacgctcaagaacaccgttgca
gaggatgcttaccgacctggagatcaagtcgaagtgtacaaaggtgaacaacaaggcata
atcggaaaaacggtcgcgaccagaggcgatattatcacgttggaggtcacagaaggtgac
atgaagggacaagtaatagatgcgccgatcaaaaccctacgaaagcgattccgtgaaggt
gaccatgtcaaagtcattggcggtagccgttatcaggatgaacttggtatggtggttcag
gtcaagggtgatagtgttaccatactcagtgatatgagtatggaagaaatcactgttttc
agcaaggacttgcggctttcgaccgagtctggtgttgatggcaagcttggaacgtttgac
gtgcatgaccttgttcagcttgatgctactaccgttgcttgcattatccaagttgatcgc
gagtcactgcgtgtcatagatcagaatggctctgtcagaaacgttctaccgtcgcgaata
gcatccaaaatcgccaagcgcaaagacgctgttgcgacagaccgcaacggtgcggagatt
cggcatggagatacagtgcgcgagatgtatggagaacagcgcagtggcgtcatcatgcat
attcacagatctttcctcttcttgcataacaaggcgcaggccgagaacacgggtgttatt
gtggttcgtacttcgaatgttgttacggtgtccgcaaagggaggccgtgctacaggtccg
gatttgtcacgcatgaaccctgctatcatgcaacgcccacctcaaggaggagccatgccg
cctccacgtgctggccgagaccggcttattggaaagactgtcggtatcacgaaaggcagt
tacaagggtctaatcggtattgttcgagagactacggaggacctagtacgtgttgagcta
catactaaaggaacgaaagtcatggttcctcggaccggtgttgttgtcaaggatcctatt
accggtcaaactatcgacatgggtcgtggaggtcgaccccgtgtgcctggaggccctgga
ggaccaccacaaccaaattgggctggctcgcgaacacctatggcctcgctggattcgagg
actccggcatggggtggatcactgtcttcacgaactcctgcttggggaggctccgcggcc
agtggctcacgcacaccagcctggaaagccgacggttctcgcacagcttacggcggcgca
atgggaggaggacgcaccccagcctggaacagcggtgcccggacaccctatgactcaggt
agcggtggtagcggcggcggcttcgacgccttcgcagccggatctcgtaccccagcctgg
ggcgctgcaacaggcagtcgcacacccgcttggaccgccaacagcaactccgcaccttct
gctgcagccaacaccggacggtacgatgcaccaacccccggaggcgactactcagcaccc
acacccggcgcatatcccacagctcctacaccaggcgcttcaggcacagcttccactcct
cgctgggccgaaagcgcaccgacacccggagctctcaatgcgcctacaccaggcgccgga
ggtggtggcggtggccttactgtcggtggacgattaccctatgacgctccaacaccagca
atggctgccacacccggtgcgatgggggatgataatccgacatatttggatgattcggag
tag
DBGET
integrated database retrieval system
