Talaromyces marneffei: EYB26_008069
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Entry
EYB26_008069 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
tmf
Talaromyces marneffei
Pathway
tmf03420
Nucleotide excision repair
tmf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EYB26_008069
09124 Replication and repair
03420 Nucleotide excision repair
EYB26_008069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmf04121
]
EYB26_008069
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_008069
Ubiquitin system [BR:
tmf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EYB26_008069
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
EYB26_008069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD_LRWD1
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
79168042
NCBI-ProteinID:
XP_054123303
LinkDB
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Position
6:join(1544810..1544845,1544898..1545046,1545108..1545209,1545258..1546365)
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AA seq
464 aa
AA seq
DB search
MYEFLSAEQGPGLLEPSPGIQFRSRKGAHEDENSTSQNTYDDNLAHKGGVNVLAIDRNYG
RYLVSGGADPSIRLWDLDDRGAELLYLYKPKAWVDRARHELAHTHSLTSISIYPFDPTPS
TVLTTSRDNTLKLSAIGNAEITPAHTFNLHATPYCHSLSSHSASTLLIAAGTSERTIRLL
DLRSGLATHTLLGHDSAVLSLEWAPHRPYILASASTDNRAIIFDIRKAGTSSAIGSLDMD
NTAGVSAQSWTSGSVAKYHAFTRHGRAHNGALTGVRWTSNGSHLITAGQDSRLRVWDATT
GANTLVHFGPRLRNDASTHLTERAPLILPSSLVESGHEILLWPNFNDQEDRGEILMFEIR
DGTFIKTLKVPGLMSTTRKQRMGKTSALSAGRINGLAWRGNGGSGEGLELFSAHGDGTIR
TWASRVPEGEPDTEGHDELDTRKRKRDVLEEIYEGLTGSSVTFT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaattcctttctgctgaacagggcccagggctccttgagccatcgccaggaatc
cagtttagaagccgtaagggtgcccatgaagacgagaactctacatcgcaaaatacatac
gatgacaatttggcgcataaagggggcgtgaatgttcttgcaattgacaggaattatgga
cgatatctggtgtcggggggtgctgacccttccattcgtttatgggaccttgacgacagg
ggcgcagagcttctgtatctttacaaacccaaggcttgggttgatagagcccgccatgag
cttgctcacacccattcgctaacatcaatatccatttacccgtttgatcccactccatcg
actgttctaacaacatctcgcgacaacacgttgaagttgtcagctatcggaaatgctgag
attacgcccgcacataccttcaatctacatgctacgccatattgtcattcactttcatcg
cattcagcttcaacgcttttgattgcagctggtacgtccgaaaggacgattcgtcttctc
gacttgcggagtggactggcaactcatacacttctcggccatgactcggctgtgttatcc
ttggaatgggctcctcaccgcccatatattcttgcgtcagcctcaacagataatcgagct
attatattcgacattcgcaaagcaggtacaagctccgccattgggtccttagatatggat
aatacagcaggggtgtctgcacaaagctggacttcaggttctgttgcgaagtaccacgct
ttcactcgccatggacgtgctcataacggtgcattgactggggtcaggtggacttcgaac
ggtagccatttaatcactgctggccaagactcacgtcttcgggtgtgggatgcaacaacg
ggggctaatacactcgttcatttcggtcctcggcttcgaaatgatgcgtccacacatctt
acagagagagcgccgctcatcttgccgagtagtctcgttgagtctgggcacgagattcta
ctatggccgaatttcaacgatcaagaggaccgtggcgaaatcttgatgttcgagatacgg
gatgggacatttatcaagacactgaaagttccaggactcatgtcaactacacgcaaacaa
cggatgggtaaaacaagcgcgctaagcgctggaaggattaatggcttagcctggcgaggc
aatggaggatctggagaaggtctagaattgttctctgctcatggtgatggtactatcaga
acgtgggcgtctcgtgtacccgagggcgagccagacacagaaggccatgacgaactggac
acaaggaaacgtaaacgagatgttcttgaggagatctacgaaggtctcactggctcatct
gtgacatttacgtaa
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