Talaromyces marneffei: EYB26_008087
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Entry
EYB26_008087 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14306
nuclear pore complex protein Nup62
Organism
tmf
Talaromyces marneffei
Pathway
tmf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EYB26_008087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_008087
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EYB26_008087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
COG4_N
ParB
Sey1_3HB
MG280
DUF1664
Motif
Other DBs
NCBI-GeneID:
79168060
NCBI-ProteinID:
XP_054123321
LinkDB
All DBs
Position
6:join(1599311..1600893,1600943..1601066,1601116..1601331)
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AA seq
640 aa
AA seq
DB search
MSGGFSFNPPSSTGASSGGLFGSKTPTTTTTGGSLFGGLGGASSPSLFGTANPSSGQNNP
FGAKTTGAGSGASTPAFSFGGTGSPFGGLNQTPNNKTTEAAAPAQTQTAGSLFGAKPSGG
GGLFGSNTPAQAKTGSNMFSTTPANPPPGGGTTGSAPSLFGAQPAQKQLPGGGLTSQAAT
TATTSPTTTSQPSAGGLFGQTTAATDKPLFGAAPSTTGGSALFSAAKTPATSEGGAKSLF
GTATASPTTTTQAPPSFFKLPTANAGGNASASPFGAPVASASPLQPSTTAASEATPQKSL
FNLGGTTSTTPSSTPAAAPSLFAAKPAATTATSTPAATAPATTAPSGGLFGVKPAATTAT
TTTATPTTTTTTGAATTTAAAAPSVTAPIAAPSGAPKAAAPNLGASTFGPTPPAQSRLKN
KTMDEIITRWATDLTKYQKEFKEQAEKVAEWDRMLVVNSGKVQKIFGNTVDAERATQEVE
RQLASVEGQQEELNAWLDRYEREVDEMLSKQVGPGEALQGPDQERERTYKLAEKLSERLD
EMGKDLGSMIEEINNASSTLSKTNKTDEPISQIVRILNSHLSQLQMIDQGTAELQAKVSV
AQKAGQALGSRLGGYGQNGGSIGVGGSAADDFYRSYMGRR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattttccttcaacccgccatcgtccactggagcttccagtggtgggctt
ttcggatcgaaaacaccgacgacgacaacaaccggtggcagcttgtttgggggtctagga
ggtgcttcatctccgtcactattcggcacagccaaccctagctctggacagaacaatcca
ttcggtgcaaagacaacgggtgctggaagtggtgccagtactcctgctttcagtttcggt
ggcacgggctctccgttcggtggattaaatcaaactccaaataataaaaccacagaggca
gccgctcctgctcagacacagacagctggtagtttgttcggtgcgaagcccagtggaggt
ggcgggctcttcggcagcaatactccagctcaggcaaaaaccggctcaaatatgttcagc
acaacaccagcaaatccacctcccggtggtggtactacgggttcggcgccatctctcttc
ggtgctcaacccgctcaaaaacaactgcctggtggtggattaacttcacaagcagcaact
actgcaactacttcacctactacgacatctcagccatccgccggtggtttatttggacaa
actactgccgctaccgacaagccacttttcggtgctgcgccttctactacaggtggaagc
gctctttttagtgctgctaagacaccagcgacatcagagggcggggccaagtctctattc
ggcactgcgacggcatctcctactactaccacacaagcaccacccagtttctttaagctc
cctactgccaatgctggaggcaatgcatctgcttctccgtttggtgctcctgttgcatcc
gcgtcaccattacaaccctcaacaacggccgcctctgaagccactcctcagaaaagtcta
ttcaatttaggtggtacaacttctactactccctcttcaacacccgcggctgctccgtca
ctttttgctgcaaagccggcagcgactactgcaactagcacaccggcagcaacggcaccg
gcaacgacagcgccaagtggtggactttttggagtcaaaccagcagcgacaactgcaact
acaaccacggcgacaccgaccactacaacaacaactggcgcagccactactactgctgct
gctgccccctcagtaactgctccaatagctgctcctagcggcgctcccaaagcagcggca
ccgaatcttggagcttcgacatttggacccacgccacctgctcagtcacgtctgaagaac
aaaactatggatgaaattatcacacgatgggcaaccgatcttacaaaataccagaaggaa
ttcaaggaacaagctgagaaggtggcagaatgggatcgcatgcttgtggtcaatagtggc
aaggtgcagaaaatatttggaaacacagttgatgcagagcgtgcgacgcaggaagttgaa
cgtcaacttgcgtcggtggaggggcagcaagaggagctgaatgcatggctcgatcgatat
gagcgggaggttgacgagatgctgtcgaagcaggttggaccgggcgaggctctgcaggga
cctgaccaggagcgcgagagaacttacaaactcgcggagaagctttcggagcgcttggac
gaaatgggcaaggatcttggaagcatgattgaggaaatcaacaatgcgtcgtctacattg
agcaagaccaacaagactgatgaacctatctctcaaatcgtccgaatcctaaactcacat
ctctcccaacttcaaatgatcgaccaaggcacggccgagctccaagccaaggtcagtgta
gcacaaaaggcaggacaagcattaggctcgcgactgggtggttatggacagaatggaggc
agcattggagttgggggaagtgcagctgatgacttttatcggtcgtacatgggccgccga
taa
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