Talaromyces marneffei: EYB26_008459
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Entry
EYB26_008459 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EYB26_008459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmf03400
]
EYB26_008459
Enzymes [BR:
tmf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EYB26_008459
DNA repair and recombination proteins [BR:
tmf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EYB26_008459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
79168432
NCBI-ProteinID:
XP_054123687
LinkDB
All DBs
Position
6:join(2666325..2666416,2666469..2667226,2667287..2667648)
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AA seq
403 aa
AA seq
DB search
MSVYFTEWRKLPISLSELCINTTLRCGQSFRWQQRPDSDEWRCVLRGRLVSLRQDQSYLY
YRSCTPHKPTSSVPTMNGTVNTSDETREIVTHYLNLTSNLTDLYNQWSDSDPNFKKKAPN
FTGIRILRQDAWEALVSFICSSNNNIARISQMVEKLCANYGDLVATIDDRSYHDFPAPEA
LTGKDVEARLRELGFGYRAKYIYQTAVMVSEKEKGWLDSLRNPESPAFGVAPSQGGEMRP
EGREGYRDAHEKLLELQGVGPKVADCVCLMGLGWGEAVPVDTHVWQIAQRDYKFGKGGNK
SLTKATYDAVGAHFRKLWGKEAGWAHSVLFTADLRSFSDRLATKVEVKVKQEDDVPVKTT
ITSPVAVKRALDEDDTKPVKKADLVVQVTETVVTRRRSKRQRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatatttcacagaatggcgcaaattgcctattagcctgagtgagctctgtatt
aataccacattgagatgtggccaatcttttagatggcagcaacgtcctgacagtgatgaa
tggcgatgcgtcctccgcgggcgtctcgtatcattgcgacaggaccaatcgtacttgtac
tatcgatcttgcactccccataaaccaacatcttcagtcccgacgatgaatggtacggtg
aatacatcagacgagacccgcgaaatagtcactcattacctcaacttgacctctaacctc
accgacctatacaaccaatggtccgactccgatcccaatttcaagaaaaaagcgcctaac
ttcacgggcatacgcattctgcgtcaggatgcatgggaggccctcgtgtcatttatctgc
agcagcaacaacaatatagcccgtatatcgcaaatggtggagaaactatgcgcaaactac
ggtgatctggtggctaccattgacgatcgatcttatcacgatttcccggctccggaagcg
ttgactggtaaagatgttgaagcgcgactgagagaattgggctttggttatcgtgcgaaa
tacatatatcagactgcggttatggtttcggaaaaggaaaagggctggttagactcgcta
cgcaatccagaaagccctgcgtttggcgttgcgccgagccagggaggtgaaatgcgacct
gaaggtagagagggttaccgtgatgcccacgaaaaacttctcgaactacaaggagttgga
cccaaggtggctgattgtgtttgtctaatgggtcttggctggggagaagcagtgccagtc
gacacgcatgtctggcaaattgcgcaaagagattataagttcggcaagggcggtaacaaa
tcattgacaaaagccacctacgatgccgttggagcacattttcgcaaactttgggggaaa
gaagccgggtgggctcatagtgtcctctttacggcagatctcagaagtttctctgatcgg
ctagctactaaggttgaggttaaggttaagcaggaggatgatgtgccagtgaaaacaaca
attacgtctccagtggccgttaaaagggcgcttgacgaagacgatacgaagccagtcaag
aaagcagaccttgttgtccaggtgactgagactgtggttactcgccggagatctaaacgg
caacgcaggtga
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