Talaromyces marneffei: EYB26_008538
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Entry
EYB26_008538 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tmf
Talaromyces marneffei
Pathway
tmf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYB26_008538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_008538
03036 Chromosome and associated proteins [BR:
tmf03036
]
EYB26_008538
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
EYB26_008538
Coactivators
SAGA/TFTC/STAGA complex
EYB26_008538
Chromosome and associated proteins [BR:
tmf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
EYB26_008538
STAGA complex
EYB26_008538
TFTC complex
EYB26_008538
SAGA complex
EYB26_008538
SLIK complex
EYB26_008538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
LisH
NBCH_WD40
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
PEP5_VPS11_N
PROPPIN
Beta-prop_WDR19_2nd
Beta-prop_VPS8
eIF2A
VPS8_N
Motif
Other DBs
NCBI-GeneID:
79168511
NCBI-ProteinID:
XP_054123764
LinkDB
All DBs
Position
6:complement(join(2871217..2872279,2872330..2873144,2873196..2873239,2873294..2873432,2874277..2874465))
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AA seq
749 aa
AA seq
DB search
MSAPGGGAPSPAPRSGSIGPNATMPVPQQQPIAANPPVIHTPTTPGPSGPSPAPVSQQNL
NQIVIDYLAKKGYTRTEAMLRMESASQDIDGRSLPQLNENQRPKYRNGFDLLKNWIEDNL
DLYKPELRRVLWPLFVYSFLDLATALYPQDAEQFFSANKNLFLPEHSEDIRSLQKISLPE
HVQDNATAKLYRGNKYRIILSNPAFSNLMQFLESKSKEGGAVMSAILSSYCSIVTKDRAA
DERFSFAAMLGRADQTSTFPAEDEGIPGHHPGSAYTGDNPVMAGTLPKLRLGKLPPEPEL
ESDVRAELEEHDLKNPPPPGRNTLVQEYDQMIKKEEDEDAPSHAEIAFPPSTARDVAMEV
QRVKENRDRFRIEGRTGGVGVACSVCLFTFHNTYDRMICTDFSDDNMLVAAGFEDSYIRV
WSLDGKAIKATHEGVEEHTSTPSNSKRLFGHSGPVYAVKFAPSAQRSESEMAPTNARWLL
SSSADKTIRLWSLDLWQCMVVYKGHDQPVWDLSWGPFGYYFVSGGHDKTARLWATDRIRQ
QRIFAGHDQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSR
NGKLLASADDHGSIFLWDLAPGRLLKRMRGHGKGGIWSLDWSVESTVLVSSGADNTVRVW
DIAPPAPEPSANTARLATETGTGAKVDANATSSAAQPSATVGPGGSKKKGKENVVTPDQI
SAFPTKKSPVYKVKFTNMNLIVAGGAYLP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccaggcggtggtgcccccagccctgctccacgcagtggcagcattggtccc
aatgccactatgccagtgcctcaacagcagcctatcgctgctaacccgccggtaatccat
acgcctacgactccaggcccgtcggggccttctcctgctcctgtttcgcagcagaatctg
aatcagattgtcatcgactacttggccaagaagggttacaccagaactgaggctatgctt
cgtatggaatctgcgagtcaagacattgatggcagatctctacctcaactcaacgaaaac
caacgaccaaagtacaggaatggatttgatcttctcaagaattggatcgaagacaatctt
gacctttacaagcccgaacttcgacgagtgctctggcctctattcgtttattcattctta
gatttggcgaccgccttgtacccccaagacgcagaacaatttttcagcgcaaataagaat
ctattcctacccgagcatagcgaagacattaggtcactacagaagatcagcctgccagaa
catgtccaggacaacgcgaccgcaaagttatatcgaggaaataaataccgtatcatccta
agcaaccctgcgttttccaacttgatgcagtttttggaaagcaagtcaaaagaaggagga
gctgtaatgtccgcaatactcagcagttattgcagtatcgtcaccaaggatcgcgccgcc
gatgaacgcttcagctttgctgcaatgttaggccgtgctgatcaaacaagcacgttcccc
gcggaagatgagggtatacctggtcaccatcctggatctgcgtacactggcgataatcct
gttatggccggtacgctacccaagctcagacttggaaagctaccgccagagccagagtta
gaaagtgacgtacgtgccgagctggaggaacacgatttgaagaatccacctcctccaggc
cgcaatacacttgttcaagagtatgatcagatgatcaaaaaggaagaagatgaggatgcg
ccttcacatgctgaaattgcgtttcctccatcaactgctcgtgatgttgccatggaagtg
cagcgtgtcaaggagaatcgcgaccggtttcgcatcgaaggtcgcactggaggtgtcggt
gttgcatgttctgtctgtctttttacgtttcacaatacttacgaccgaatgatttgcact
gatttctccgatgacaacatgctggttgctgcggggttcgaagattcgtacattcgcgtt
tggagtcttgatgggaaagctattaaagctacacacgaaggtgtagaagagcacacgagc
acgccgtccaactcaaaacgtctctttggccattcagggcctgtttacgccgtcaaattt
gctccatcagcacaacggtcagaaagtgaaatggctcctacgaatgctcgatggcttctt
tcgtcctctgcagacaaaacgattcgactctggtcactagacttatggcagtgcatggtg
gtctacaagggacacgatcagcccgtttgggatcttagctggggtccattcggttattac
tttgtatctggtggacatgacaagactgcgcgactatgggctactgatcgaattcggcaa
cagcgaatctttgcaggacatgaccaagacgttgattgtgtctgtttccatccaaactcg
gcatatgtctttactggaagttcagatcgcacagttcgcatgtgggcggtgactactgga
aacgccgtacgtatgtttactggtcatactggcaacatcacagctcttgcctgcagtcgc
aacggcaagctgcttgcatcggcagatgaccacggatctatctttctatgggatctagca
cctggccgtctattgaagcgtatgcgcggacatggtaagggtggtatctggtctttagac
tggagtgtggaatctactgttttagtctcttcaggcgcagacaatactgtgcgtgtatgg
gatattgcaccaccagcacccgaaccatcagccaatacagcacgattggccactgagaca
ggaacgggggccaaagtcgatgccaatgcgacttcctctgctgcccagccatctgctacg
gtggggcctggtggtagcaagaagaaaggtaaagagaatgtggtgactcctgaccagatc
agtgcttttcccacgaagaagagcccggtctataaggtcaagtttacgaatatgaacttg
attgttgctggaggtgcttatcttccgtga
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integrated database retrieval system
