Talaromyces marneffei: EYB26_009077
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Entry
EYB26_009077 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03679
exosome complex component RRP4
Organism
tmf
Talaromyces marneffei
Pathway
tmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYB26_009077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmf03019
]
EYB26_009077
Messenger RNA biogenesis [BR:
tmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EYB26_009077
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
EYB26_009077
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
79169050
NCBI-ProteinID:
XP_054124303
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Position
7:complement(join(1165796..1166735,1166794..1166996))
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AA seq
380 aa
AA seq
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MGITILAPAVEDAASHYTDRDFEAQDSEGDVDMDRLQIKRPRLDQASGFGTGTVVPGETV
TNDPQWMRGHGTFTTPFSTSIIATVAGTVSKTNKLLSVHPLRARYMPEIGDLVVGRIVEV
QARRWKVDIAAPLLAQLPLSAINLPGGILRRRTSADELQMRNFFVEGDLVVAEVQSVHQD
GSATLHTRSLSYGKLRNGVFMTVTGTGGSGSAVSKKSSAAASNLAAPSSAAAVGGVVRSR
RQKWTINAANGGGDIEIILGVNGYIWISKLADGAAASTTETVSITRMEEMATHSIYSSQN
NEIPRQTRREIARLAGCIRVLVEGGVRIEHDTVMSAYNASLEVDLEMADQEYDAAKPAVS
QEGQDYLGGAKAQRILEMLG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcacgattctcgcccccgcagtggaagatgcggcctcacactacactgatcga
gatttcgaggcacaagactcagagggcgatgtggacatggacagattacagatcaaacgg
cctcgtcttgatcaagcctcggggtttggcaccggaactgtcgttcctggtgagaccgtc
accaacgatccgcaatggatgagaggccatggaacattcaccacccccttctcaacctcc
atcatcgccacagtcgcaggcacagtctccaaaaccaacaaattattgtctgtccacccc
ctacgagcgcgctacatgcctgaaatcggcgacctcgtggtcggccgcatcgtcgaagtc
caagcacgcaggtggaaagtcgacatcgccgctccgttacttgcgcaactgcccctctcc
gccatcaacttaccaggtggtattctgcgccgacgcacgagcgcagatgaactacaaatg
agaaatttctttgttgaaggagacctggtcgtcgccgaagtgcagagtgtacatcaagac
gggtccgcaaccttacatactcggtcgttgagttatggtaaactacggaatggcgtattt
atgaccgtcaccggaacgggtggtagcggttccgctgttagcaagaaaagcagcgctgct
gcgtcgaatctcgctgcgccgtcatcggcagctgccgtcggaggtgtcgttcgatcgcga
cgacagaaatggaccatcaacgcagccaatggcggcggcgacattgaaataattctcggc
gtgaacggatacatttggatctcgaaactcgcggatggcgctgccgcatctaccacagag
acagtctcaatcacccgcatggaagaaatggccactcactcgatatattccagtcaaaac
aacgagatcccgcgccagacaagacgcgaaatcgcgcggttggcgggatgcatccgtgtc
cttgttgaaggcggtgtgcgcattgagcacgatacggttatgtcggcgtataatgctagt
ttagaagttgatttggagatggcggatcaggaatatgatgctgctaaacctgccgtttcg
caggaagggcaggattatttgggtggagcgaaggcgcagcgtattcttgagatgcttggt
tag
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