Talaromyces marneffei: EYB26_009140
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Entry
EYB26_009140 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tmf
Talaromyces marneffei
Pathway
tmf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EYB26_009140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmf03009
]
EYB26_009140
Ribosome biogenesis [BR:
tmf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EYB26_009140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_IFT140_2nd
Beta-prop_WDR19_1st
DUF7165
PEP5_VPS11_N
PALB2_WD40
DUF5046
eIF2A
Motif
Other DBs
NCBI-GeneID:
79169113
NCBI-ProteinID:
XP_054124365
LinkDB
All DBs
Position
7:complement(join(1355881..1356465,1356519..1357157,1357208..1357441,1357497..1358984,1359062..1359184))
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AA seq
1022 aa
AA seq
DB search
MPSITGDGFDLPVSKRQRITQPQLSAQEKKESQSRIFSHFRTLGLVSPTTVPFTSVRLGK
STYQITTSVGRVLQTYDLKRGLSLVFASQPRTPGLITATCAWKNYVFAAWGGLRPGEDSG
IWVFQRGKKIAELEISPNTTGSVSRILVFGSWIIGCCERSIQVWKNPSFEHYTTLVPEIS
PGASDLPVFTGHVCNMPTYLNKIFVGRYDGTVELWNVSSGKLLYRFSPATAKDDAVTAIE
ATPVLSLIAIAYRSGTVVLRNVDSDEVLMSLNASTSKSHPITSISFRTDGMGAGEDGRMA
GVMATASMYSGDVTLWDLNNGGKKTGVLRSAHDMTAQSSDSGVNKIEFLDGQPVIVSSGR
DNALKTWIFDSSPFSPIPRPLHSRGGHAAAVCSLRFLPSASDGSDSIGKWLLSASRDRSF
WAFSLRKDSQNVELSQGKVKAAAKKRGISSAAEAAEELKAPEITSIACSLNRDPGMGASS
QQVWTNSRDLKKHPQGENGWESVITAHRGDKYARTWYWGKKKAGRWVLETSDGTEVKSVA
ISNCGTFAAVGSAGGIIDVYNLQSGQRRQRFPPSSSKNNKLGNVSASGHTKAITGLAIDN
LNRNVVSCGLDGKLKFWDFNSGHLLADLDWAPMTAITGLRFSSINELAALSCDDLSIRVV
DLETKKVVRELWGCRGQINDFVFSIDGRWIIAASMDSIIRVWDLPTGHLVDIFRVPTTCT
ALAFSGTGEYLATAHAGEVGVHIWNNKSLFTNFRPVHIDETALVSNVASVTSTESGSSMV
DAALTADVDDEDQDKTAISFEQLDRDMTTLSIVPRATWQTLINLDIVRARNKPKEPAKAP
EKAPFFLPSLQDDQSAAPIAGIDDQKESERMPISKSILSQQDSPVSKLLRSGSNNKNFSP
FIDYFKSLSPGKIDLEIRSLNVQLLRDGYCELVSFVDALTERLCLKKDFELVNAWMAVFL
KVHSDLICGDGELATVSSDEDLVSTLRTALMGWKKEQESEAKRLSELMGYCRGIVGFLRS
SR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgccttctataaccggagatggctttgaccttcccgtgtcgaagcgacagagaataacg
caaccgcaattgtccgcgcaagagaagaaggaatcgcagtcccgaatcttttctcatttc
aggactctcggcttagtctcgcccaccacagttccgttcacctccgtgcgtcttggaaaa
tctacatatcaaatcacaacttcggtaggaagggtacttcaaacctatgacctcaagcgt
ggtctgagtctggtctttgccagccaacctcgaactccgggattaattacggcgacatgc
gcctggaagaactatgtgttcgcagcttggggagggctacggcctggagaagattcagga
atatgggtgtttcaacgaggaaagaagatcgctgagttagaaatttccccgaataccacc
ggttccgtttcgcgaatccttgtatttggatcctggattattggctgttgcgaaagaagt
atacaagtttggaagaatccgtctttcgagcattatacgacattggttccggagatttca
ccaggcgcttcagacttaccggtgttcacaggccatgtttgtaacatgcctacttatttg
aataagatatttgttggaagatatgatggtaccgttgagctctggaatgttagcagtgga
aagcttctgtacaggttttcgcctgcaacggccaaggatgatgcagtcactgcaatagaa
gcgactccagtcctatcactcatcgccattgcttacagaagtggcaccgtcgtccttcga
aatgttgactctgatgaggttctcatgtcgctgaacgcatcaacatcaaagtcacatcca
ataacttcgatatccttccggactgacggtatgggagctggtgaagacggtaggatggcg
ggagtcatggccaccgcgtctatgtacagtggtgatgtcactctctgggatctgaacaat
gggggcaagaagacaggggtactcagaagtgcgcatgatatgactgctcagagctctgac
agtggtgtcaacaagattgagttcttggatggtcagccagtcatagtctcgtccggaagg
gacaatgccctgaagacgtggatatttgacagttcacccttctcaccgatcccaagaccc
ttgcattcaagaggtggtcatgctgcagcagtctgttcccttcggttcttgccctctgct
tccgacggtagcgactctatcggtaaatggctgctcagtgcatccagagaccgctctttc
tgggcattcagtctgcgcaaagatagccagaatgtcgagctatcacagggtaaagtcaag
gccgctgccaagaaacgtggcatatcgagcgcagcagaggcggctgaggaactcaaagcc
cctgaaattacatcaattgcttgctcgctcaatcgtgatcctggaatgggagcaagtagc
caacaagtatggaccaattcaagagatctcaagaagcatccacagggagaaaatgggtgg
gaaagtgttataacagcgcatcgaggtgacaagtatgcgcgcacttggtactggggtaag
aaaaaggctggtcgttgggtactcgagacgagtgatggaacagaagtcaagagcgtggca
atttcaaattgtggtacctttgctgcagtgggttccgcggggggtattattgacgtctac
aacctacagtctggccagcgtcgacaacggttcccgccatcgtcatcaaaaaacaacaag
cttggaaatgtctcggcctcgggacacaccaaggccattactggtcttgcaatcgataac
ttgaaccggaatgttgtgagttgtggattagatgggaagctcaagttttgggatttcaac
tccggtcatcttcttgctgacttggattgggcgcctatgacggccatcaccggactgcgt
ttcagtagtatcaacgaacttgcagctttgagttgcgatgacctatctattcgtgtggta
gatttggagacaaagaaagttgtccgagaactctggggctgccgagggcagattaacgac
tttgttttctccatcgacggcagatggattatagccgcatctatggactctatcataaga
gtctgggacttgccaacggggcacttggttgatattttccgagtaccaacaacatgtact
gcccttgccttctctggtacaggtgaatatcttgccactgctcatgcgggtgaagtcggt
gtacacatttggaacaacaagagtctctttaccaacttccgacctgttcatatcgacgag
accgcgctagtatcaaacgtggcttctgtgacatctactgagtcaggatcaagtatggtt
gatgctgccctaaccgccgatgtggatgatgaagaccaagacaagacggccatatcattc
gaacaacttgacagggacatgactacattgagtattgttcctcgggcaacctggcaaaca
ctgatcaacctggatattgtcagggctcgcaacaaacccaaagaaccagccaaagctcca
gaaaaggcaccttttttcctaccatctctccaagacgatcagtctgcagcccctatagct
ggcattgacgaccaaaaggagtcagaacgaatgccgatttcgaagagcattctatcacaa
caggactcacccgtcagtaaattgttgagatccggctcaaacaacaagaacttttcacct
ttcatcgattacttcaagtccctctcgccaggaaagattgatctagaaattcgctctcta
aatgtccagctattgcgagatggatactgtgagctagtcagctttgtggatgcattgacg
gagagactttgcttgaagaaggatttcgagctcgtcaatgcctggatggctgtgtttttg
aaagttcatagcgacctaatatgtggtgatggtgagttagcaactgtttcttcggatgag
gatctggtgagcactttgcgtactgctctgatgggttggaagaaggagcaggaaagtgag
gctaaacgattgtctgagttgatgggttactgtcgtggaattgttgggttccttcggtca
tctcgttag
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