KEGG   Talaromyces marneffei: EYB26_009446
Entry
EYB26_009446      CDS       T06392                                 
Name
(RefSeq) uncharacterized protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tmf  Talaromyces marneffei
Pathway
tmf03020  RNA polymerase
tmf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EYB26_009446
  09124 Replication and repair
   03420 Nucleotide excision repair
    EYB26_009446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tmf03021]
    EYB26_009446
   03019 Messenger RNA biogenesis [BR:tmf03019]
    EYB26_009446
   03400 DNA repair and recombination proteins [BR:tmf03400]
    EYB26_009446
Transcription machinery [BR:tmf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     EYB26_009446
Messenger RNA biogenesis [BR:tmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     EYB26_009446
DNA repair and recombination proteins [BR:tmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EYB26_009446
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 79169419
NCBI-ProteinID: XP_054124671
LinkDB
Position
8:join(266800..267048,267107..267357,267412..267421)
AA seq 169 aa
MFFLKEETKVVTLHPSFFGPNVKEYLINRLNEEEEGRCTGDHFVICVMDMVDIGDGRVIP
GSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWEP
GTVPPQYTDHADQVIERGTSLRLKILGVKPDVSAINAIGTIKEDYLGTL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgttcttcctcaaagaggaaaccaaagtcgtcaccctccacccgtcctttttcggaccc
aatgtcaaggaatatctgatcaaccgcttgaacgaagaagaagagggacgatgtacgggt
gatcatttcgtgatttgtgtcatggacatggtggatattggcgacgggcgagtgataccg
ggcagtggacatgcagaatatactatcaaatatcgcgcgatcatatggaagcctttccga
ggggagacggtcgatgccatcgtgacctcggttaaacccaccggtatcttcacgctcgcg
ggccctctgtcggtgtttattgcgcgcaaaaatataccatcagatatcaaatgggaaccc
ggcaccgtgccgccccaatatacggatcatgcagaccaggttattgagcgaggaacgagt
ctgcggttgaagatactgggtgtgaagccagatgtgtctgcgattaatgcgattggcacc
attaaggaggattatcttggcaccctctaa

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