Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0243
Help
Entry
US01_C0001G0243 CDS
T04457
Name
(GenBank) hypothetical protein
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
tmg
Candidate division TM6 bacterium GW2011_GWF2_28_16
Pathway
tmg00450
Selenocompound metabolism
tmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
US01_C0001G0243
Enzymes [BR:
tmg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
US01_C0001G0243
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
US01_C0001G0243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AKM81202
LinkDB
All DBs
Position
252663..253877
Genome browser
AA seq
404 aa
AA seq
DB search
MLDIEKIKKDFPIFANHKKLIYLDSAATSQKPQIVIDRIAKFYSSENANVHRGVHPLSEQ
ASEAYDLARKKVANFIGAKSNREIIFTKGTTESLNLVAQSFALENLKNGDEILVTDFEHH
SNLLPWQMVCQKTGAILKILNSDEAGFIGPQELKNKLNKKTKIVAVAHASNVLGIISDIK
KIAKIVHNVGAVLVVDGAQAIPHLQVNVQDLDCDFYAFSGHKMLAPMGIGVLYVREEILA
EMFPYQLGGGMIEEVTFEKVTFADYPEKFEAGTPNVAGAIALASAVDYLSAIGLEEIRKH
EIELSKYLLDGLSKIKEVKLLGNASAKERTGLVSFYVEDIHAHDLSDFLAKQGLALRAGF
HCSMPLHQSRHCGATLRASYYLYNNEQDLKSLFNNLKKAIAYYG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttagatattgaaaaaataaaaaaagattttccaatttttgctaatcataaaaaatta
atttatttggatagtgctgctactagtcaaaaaccacaaatagtaatcgacagaattgct
aaattttatagtagcgagaatgctaatgtgcatcggggtgttcatcctctgagtgagcaa
gcaagcgaagcttacgatttagcgagaaaaaaagtggctaatttcattggcgctaaaagt
aatagagaaataatttttaccaaaggtacaactgaatcactaaacttagtggcacaaagt
tttgctttggaaaatttaaaaaatggtgatgaaattttagttactgactttgaacatcac
agtaatcttttaccttggcaaatggtttgccaaaagactggcgcaattttaaaaatttta
aatagcgatgaagctggttttattggtccacaggaattaaaaaacaagttgaataaaaaa
actaaaatagtcgctgtcgctcacgcctcaaatgttttgggaataatcagcgatattaaa
aaaattgctaagatagttcacaatgttggggcagttttagtggttgatggtgcacaagcc
attccgcatttgcaagttaatgtgcaagacttagattgtgatttttacgctttcagtgga
cataaaatgttagccccaatgggcattggtgttttatatgttagagaagaaattctagcc
gagatgtttccttaccaattaggtggcggaatgattgaggaagttacttttgaaaaagta
acttttgctgattatccagaaaaatttgaagctggcacacctaatgtagccggagcaatt
gcactagcaagtgcagtggattatttatcagcaattggtttggaagaaattagaaaacat
gaaattgaattaagtaaatatttgttagatggtctaagtaaaataaaagaggtcaaactt
ttaggcaatgcttctgccaaagaacgtactggtttagtttctttttatgttgaagatatt
catgctcatgatttgagtgactttttagctaagcagggtttagctttgcgtgctggtttt
cactgcagcatgccacttcatcaaagccgtcactgtggtgctacactacgagcttcttat
tatttgtataataacgaacaagacttaaaatctttatttaataatttaaaaaaggcaatt
gcttactatggatga
DBGET
integrated database retrieval system
