Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0481
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Entry
US01_C0001G0481 CDS
T04457
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tmg
Candidate division TM6 bacterium GW2011_GWF2_28_16
Pathway
tmg00521
Streptomycin biosynthesis
tmg00523
Polyketide sugar unit biosynthesis
tmg00525
Acarbose and validamycin biosynthesis
tmg00541
Biosynthesis of various nucleotide sugars
tmg01100
Metabolic pathways
tmg01110
Biosynthesis of secondary metabolites
tmg01250
Biosynthesis of nucleotide sugars
Module
tmg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tmg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
US01_C0001G0481 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
US01_C0001G0481 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
US01_C0001G0481 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
US01_C0001G0481 (rfbB)
00525 Acarbose and validamycin biosynthesis
US01_C0001G0481 (rfbB)
Enzymes [BR:
tmg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
US01_C0001G0481 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
DUF5924
Motif
Other DBs
NCBI-ProteinID:
AKM81430
UniProt:
A0A0G4B1F7
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All DBs
Position
complement(458684..459700)
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AA seq
338 aa
AA seq
DB search
MQSQTLLITGGAGFIGSNFVHYYLQNHPEDKIINLDLLTYAGNLSTLKDIENNPQYKFIQ
GDIRDGQLVNKIMEDVDVVVHFAAESHVDRSIMEPAIFLETNILGTQVLLDAALKHKVKR
FHHISTDEVFGALELGSNEKFNEETAYNPHSPYSASKAASDHLVRAYGDTYGLPFTLSNC
SNNYGEYHFPEKMIPLAITNLIDDKKVPIYGDGLYVRDWLYVQDHCKGIDLILQNGENAK
TYLFGGLYKDVNNLDLIKMIIKIMGKDENAIEYIKDRPGHDRRYSVDFTKTQEALGWQPS
VSLEEGLKKTVAWYQNNQNWWRPLKTNNQAYFNKQYDT
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcaaactttactcatcactggtggtgctggttttatcggttccaacttcgtt
cattattatctccagaatcatcctgaagataaaattattaatctagatttattgacctat
gccggcaacctcagcactttaaaggatattgaaaacaatcctcaatataaatttattcaa
ggtgacattagagatggtcagctcgtcaataaaattatggaagacgtagacgtggttgtt
cattttgctgccgaatctcacgtcgatcgttccatcatggaacctgctattttccttgaa
actaatattctcggcacacaggttttactagacgccgctctcaaacacaaagtcaaacgt
tttcatcatatttcgactgatgaagtttttggagctttagaacttggctctaatgaaaaa
ttcaatgaagaaacagcttataatcctcatagtccttattctgcctcaaaagccgcttct
gatcatctggtgcgcgcttatggcgacacctatggtctaccatttactttaagcaactgc
tctaataattatggcgaatatcatttcccagaaaaaatgattcccctagccatcaccaat
ttaattgatgataaaaaagtccctatttatggtgatggactttatgtgcgggactggctt
tatgttcaagatcactgtaaaggcatcgatctaatcttacaaaatggcgaaaatgccaaa
acttatcttttcggtggactttataaagatgttaataatcttgatctgatcaaaatgatt
attaagattatgggtaaagacgaaaatgccatcgagtatatcaaagatcgtcctggtcac
gatcgtcgttatagtgttgattttacaaaaacccaagaagctttgggttggcaacctagc
gtgagtttggaagaaggcttaaaaaaaactgtggcttggtatcaaaataatcaaaattgg
tggagaccactcaaaacaaacaatcaagcttattttaataaacaatacgacacataa
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