Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0568
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Entry
US01_C0001G0568 CDS
T04457
Symbol
ine55
Name
(GenBank) tRNA pseudouridine synthase B, tRNA pseudouridsynthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmg
Candidate division TM6 bacterium GW2011_GWF2_28_16
Brite
KEGG Orthology (KO) [BR:
tmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmg03016
]
US01_C0001G0568 (ine55)
Enzymes [BR:
tmg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
US01_C0001G0568 (ine55)
Transfer RNA biogenesis [BR:
tmg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
US01_C0001G0568 (ine55)
Prokaryotic type
US01_C0001G0568 (ine55)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Swi6_N
Motif
Other DBs
NCBI-ProteinID:
AKM81517
UniProt:
A0A0G4B3D9
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All DBs
Position
553716..554414
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AA seq
232 aa
AA seq
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MLEIKKGLYLVDKPSGPSSHMVVNYFRKLSGIKKIGHCGTLDPLASGLLILLVGKEYTRT
QDLYLKKDKEYLVRARLGIGTDTYDQTGKIIKKDNWQELKDIKKTDLLRIFPQFKGKIEQ
TVPIFSAVKVKGQKLYQKARRGETVELPSRQIEIKKLILKSFEKDSKKEEVFFELLVKCS
SGTYIRSLIHDLGKKLALGAHVVALRRNKIDKFHVKKAIKMDWDSQLYQLGL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgttagaaataaaaaaaggtttatatttagttgacaaaccaagtggccctagcagtcac
atggtggttaattacttcagaaaactaagtggtattaaaaagatcggtcattgtggcacc
cttgatccgcttgcctctggcttattgattcttttagtaggtaaagaatacacaagaaca
caagatctttacttaaaaaaagacaaagaatatttagtcagagctcgcctggggattgga
accgatacttatgaccaaactggaaaaattatcaaaaaagacaactggcaagaattaaaa
gacatcaaaaaaactgatctgctaagaatttttcctcaatttaaaggcaaaatagagcaa
acagtgcctattttttctgccgtgaaagtcaagggtcaaaagctttatcaaaaagccaga
aggggagaaactgtagaattacccagtcgccaaattgaaataaaaaaacttatcttaaaa
agttttgaaaaggattcaaaaaaagaagaagtcttttttgaactattagtcaaatgttcg
agtggaacttatattcgctcacttattcacgatcttgggaaaaaactagctctaggagct
cacgtggttgcactgcgtcgtaataaaatcgataaatttcacgtgaaaaaagcaattaaa
atggactgggatagtcagctttaccaactgggcttatag
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