Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0585
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Entry
US01_C0001G0585 CDS
T04457
Name
(GenBank) polymerase III subunit alpha, DNA polymerase III subunit alpha protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tmg
Candidate division TM6 bacterium GW2011_GWF2_28_16
Pathway
tmg03030
DNA replication
tmg03430
Mismatch repair
tmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
US01_C0001G0585
03430 Mismatch repair
US01_C0001G0585
03440 Homologous recombination
US01_C0001G0585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmg03032
]
US01_C0001G0585
03400 DNA repair and recombination proteins [BR:
tmg03400
]
US01_C0001G0585
Enzymes [BR:
tmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
US01_C0001G0585
DNA replication proteins [BR:
tmg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
US01_C0001G0585
DNA repair and recombination proteins [BR:
tmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
US01_C0001G0585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKM81531
UniProt:
A0A0G4B0M8
LinkDB
All DBs
Position
565544..569002
Genome browser
AA seq
1152 aa
AA seq
DB search
MPKQDFVHLHVHTEYSMLDGLTKVVDLVKKVKSLDQSAVAITDHGNMHGNISFYNECKKE
GIKPIIGTEIYLAKNSRFDKQIRMGSDQFHLTLLAQNYIGYKNLMKMVTIANFEGFSYKP
RIDDEILEKYSEGIILLSGCMSSQTSRLLMEGKEEKALEIFKKYKKIFKDRFYVEIQNAP
HIEESKPLREKLIQVARQLDLPLVATNDSHYLEKEDAEAQDALLCVQTRKLIADEKRMKM
VDKPDFYLKSTEEMIELFSDVPEAIENTIKIAEGCNFEIPTGNLIFPSYELPKGETYETY
LYKLSFEGAKKKYGKITPEIKKRLEYEIGIINDKGYPAYFLITQDFVNWAKDQGIAVGPG
RGSAAGSIVSYSLNITTLDPLEHGLPFERFLNPERPTPPDVDIDFADIKRDEVINYVAKK
YGEDHVAAVITFGRMEARVAVRDIGRVLGMSYEDPDRVAKLIPNEPGKKVSIKSAIETIP
ELASLYKQDKFKRLLDLASKVEGTIRHSGMHACAIIIADKPLDNYTPIQKDSRSGKTLTQ
LDMYSMDCNIDDNAIGLLKFDFLGLRNLSIIQEALKLIKKYKNEDIEIDKIPTDDKKTFD
LLASGETTGVFQLESAGMRRVAKSLKPSVFSDITAMVALYRPGPMDLIPRFIEGKHNPES
IEYPHDSLKPFLEQTYGIMVYQEQILEIVHFMAGYSLGEADMLRRAIGKKKKKILDKNKS
RFIKQSVEKGYKKETVEKIWGFIEAFANYGFNKAHAASYAMIAYETAWLKANFPVEYMTS
LMSVESNSHSMNRDEKIAVAIENCRKMGIKILAPDINLSGQDFTIEEDKTSKENMAIRFG
LTAIKHVGKAAIENILETRKKENKFTSFTHFIQATDSRKVNKTTLECLIKVGAMDRFATR
ASMLENLESIRQTAGQFQSEIDGQDHLFADVGEKSTEVKDSFLKLKEYPEAELLSFEKEL
LGLYLTDHPLADALNLVNKRANMRIGELDPEFSQDQVFLFGGLLSRFKEITTKKGQKMAF
ATLEDQTGKAELIIFPRTYGELGFQLEQDQVVLVRGKVQHEEEEFKIIAEKIVIPKDEDV
EFSKDHDYKEIFVPRKTSPETLKELGALLKANLGDEKVVIIIPNGANPERIVLPYKVNYN
DELVIKIAKILT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcaagattttgttcacctgcatgttcacactgaatattcaatgttggatggt
ttgacgaaggttgttgatctagttaaaaaagtcaaaagccttgatcaatcagccgttgcc
attaccgatcacggcaatatgcatggcaatatttctttttataatgagtgtaagaaagaa
ggcatcaagcctatcattggcactgagatctatttagctaaaaactcccgctttgacaaa
cagattcgcatgggaagtgatcagttccatttgactttgttagcccaaaattacattggt
tataaaaatttgatgaaaatggtgaccatcgctaactttgaaggtttttcatacaagcct
cgtatcgatgatgaaattttggaaaaatatagtgaaggaattattttactaagtggctgc
atgagtagccaaactagccgattactcatggagggtaaagaagaaaaagctttagaaata
tttaaaaaatataaaaaaatctttaaagatcgtttctatgttgaaattcaaaatgctccc
cacattgaagaaagtaaacccctacgtgagaagctgatccaggttgcccgccaattagat
cttccactggttgctaccaatgactcccattatttagaaaaagaagatgctgaggctcag
gatgctcttctatgtgtccaaactcgcaagctaattgctgatgaaaaaagaatgaaaatg
gttgataaaccagacttttatctcaaatcaaccgaggaaatgatcgagctcttctctgat
gttccagaggcaatagaaaataccattaaaattgcagaaggctgtaatttcgaaattcca
actggaaacttaatttttccaagttacgaattgccaaaaggagaaacttacgaaacctat
ttatataaattaagttttgaaggagccaagaaaaaatacggcaaaattactccagaaatt
aaaaaaagacttgaatacgagattggcattattaatgacaaaggttatcctgcttacttt
ttaatcactcaagattttgttaactgggccaaagatcagggtattgctgttggaccgggt
agaggaagtgctgcgggatcaattgtttcctattcacttaatatcactactcttgatcct
ttagagcacggcttaccttttgaacgatttcttaatccagaacgtcccacacctcctgac
gttgatattgattttgctgatattaaacgtgatgaagttatcaattatgtagctaaaaaa
tacggtgaggatcacgtagcagctgtcattacttttggaagaatggaagctagagtagcg
gtgcgcgatattggtcgcgttttgggtatgtcttatgaagatcctgatcgcgtagctaaa
ttaattcctaacgaaccaggtaaaaaagtttctattaaatcagccattgaaaccatccca
gaactagctagcttatataaacaagataaatttaaacgcttgcttgatctcgcttctaaa
gttgagggcactattagacattctgggatgcatgcttgtgccattattattgctgataaa
cctctagataattacacaccaattcaaaaagattctcgctcaggtaaaactttgactcaa
ttggacatgtattcaatggactgcaatattgatgacaatgccattggtttacttaaattc
gattttcttggattgcgtaatttatccattatccaggaagctcttaagctgattaaaaaa
tataaaaatgaagatattgaaattgataagatccctaccgacgataaaaaaacttttgat
cttttggcctccggtgaaaccactggcgtttttcagcttgaatcagccggcatgcgacgt
gtagctaaatcacttaaacctagtgttttttcagatattactgctatggtggccctttat
cgtccaggtccaatggatcttattcctcgttttattgaaggcaaacataatccagaatca
attgaatatcctcatgattctctcaaaccatttctagaacaaacttacggcatcatggtt
taccaagagcagattttggaaattgttcactttatggctggctatagtttgggtgaagcc
gacatgcttcgtcgcgccattggtaaaaagaaaaagaaaattcttgataaaaacaaaagc
cgtttcatcaaacaatcagtggaaaaaggctataaaaaagaaactgttgaaaagatttgg
ggctttattgaagcctttgctaactacggattcaataaagcccacgcagcttcttatgcc
atgattgcctacgaaactgcttggcttaaagccaattttccggttgaatacatgacctca
ctgatgagtgttgaatcaaattctcactcgatgaatcgtgatgaaaagattgccgtcgcc
attgaaaattgtcgcaaaatgggtattaaaattctcgctccagacatcaatctttctggc
caagactttaccattgaagaagataaaacctccaaagaaaacatggccattcgctttggt
ttgactgccattaaacatgttggtaaagccgctattgagaacattcttgaaacaaggaaa
aaagaaaataaatttacttcttttactcattttattcaagctactgatagtcgcaaggtt
aataaaactactctggaatgtttaatcaaagtcggagccatggatcgctttgctactaga
gcttcaatgctagaaaatcttgaaagtatccgccaaaccgctggtcaatttcaatcagag
atagatggccaagatcatctctttgctgatgtgggcgaaaaaagcactgaagttaaggat
agctttcttaaacttaaagaatatccagaggctgaactactatcttttgaaaaagaattg
ttgggtctatatctaactgatcaccctttagctgatgctctcaatttggttaacaagaga
gctaatatgagaattggcgagcttgatccagaatttagccaagaccaagtctttcttttt
ggtggacttcttagtcgtttcaaagaaattaccactaaaaaaggtcaaaaaatggctttt
gccactctagaagatcaaactggtaaagctgaactaattatttttccacgaacctacgga
gaactgggctttcagctagaacaagatcaagtggttttagtgagaggtaaagttcaacat
gaggaagaggagtttaaaatcatcgccgaaaaaatcgtcattcctaaagatgaagatgtt
gaattttccaaagatcatgattataaagaaatttttgtaccacgcaaaacttcgccagag
actctcaaagaactcggtgcgcttctcaaagccaacctaggcgatgaaaaagtggtgatt
attattccaaacggtgccaatccagaacgaatagttttaccatacaaagtcaattataat
gatgagctagtcataaaaattgcaaaaatcttgacttaa
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