Candidate division TM6 bacterium GW2011_GWF2_28_16: US01_C0001G0670
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Entry
US01_C0001G0670 CDS
T04457
Name
(GenBank) hypothetical protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
tmg
Candidate division TM6 bacterium GW2011_GWF2_28_16
Brite
KEGG Orthology (KO) [BR:
tmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmg03016
]
US01_C0001G0670
Enzymes [BR:
tmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
US01_C0001G0670
Transfer RNA biogenesis [BR:
tmg03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
US01_C0001G0670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
AKM81602
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Position
complement(638259..640094)
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AA seq
611 aa
AA seq
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MSDLRYNKHQMENNIISLLQELEQNLDKSIEDLLRLIKKYQKSNGAHWSYSEIIEEYKKL
AGTQGLKKYNPKLVEKILLKPVRTISGVAPVTVLTKPYPCPGKCIFCPNDLRMPKSYLAS
EPGAQRAEKNYFDPYLQTTNRLEALFSMGHKVDKIELIILGGTWTAYPETYQIWFVKECF
RAMNDFQTKNDTVKIVKKYQNFQKKFKETEKKWQTKTFLSTDAKENQANFAKLQIAGENI
SDTYNQLVTKYYLAPENALGVLEYQKADWLELEKEQVKNETALQRCVGLVIETRPDEITL
KSVKNIRRLGATKVQLGIQSLDDEILRKNKRGHGVQAIRKAFALLRQAGFKLHIHFMANL
YGGSVVKDKRDFKKLFSDQDFCPDELKIYPCSLIETAELMRYYKKGLWKPYTHEELLEIT
AFTLTHTPAYCRITRMIRDIPAQDIVVGNTKSNFRQIAENYVNKTKQKMQDIRSREIRST
VFDPKEVKLKITNYKTSISQEKFLQFVYGDKILAFLRLSLPTVKKNEVIEELDGAAMIRE
IHVYGRSLSIGQKGEEKAQHFGFGKKLILKAAEISKKEGYQKLAVISAIGTKEYYRKRGF
SDGELYQFLEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttgcgttataataaacaccagatggaaaacaatataatttctcttctacaa
gaactagagcaaaacttagataaatcaattgaggatttgttgcgtttgattaaaaaatat
caaaaaagtaatggcgctcattggagttattctgagattattgaagaatataaaaagttg
gctggcacgcaaggtcttaaaaaatataatcccaaattagtagaaaagattttattaaaa
ccagtccgcactatttccggtgtggcaccggtgacagttctgactaagccctatccttgt
ccggggaaatgtattttttgtccaaatgatttgcgtatgcctaaaagttatttagctagt
gagccaggtgcacagcgagctgaaaaaaattacttcgatccatatttgcaaaccaccaac
cgtctagaggctttgttttccatgggccacaaagttgataaaattgagttaattatttta
ggtggcacttggacggcttatccagaaacttatcagatttggtttgtgaaagaatgcttt
agagccatgaatgattttcaaactaaaaatgacacagtaaaaattgtaaaaaaataccaa
aattttcaaaaaaaattcaaagaaactgaaaaaaaatggcagaccaagacttttttaagt
actgatgccaaagaaaatcaagccaattttgctaagctgcaaattgctggtgaaaacatt
tctgatacttataatcaattggtcaccaagtattatttagctccagaaaatgctttgggg
gtgcttgaatatcaaaaagctgattggctagaattagaaaaagaacaagttaaaaatgag
acggcgctacaacgctgcgtgggtttagtaatcgaaactcgaccagatgaaattacgcta
aaaagtgtgaaaaatattcgccgcttaggggccactaaagttcagctaggtatccaatcg
cttgacgatgaaattttaagaaaaaataaaagaggtcacggtgtgcaagcgatcagaaaa
gcttttgcgcttttgcgtcaggctggttttaaattgcacattcattttatggccaatctt
tatggtggcagtgtcgtcaaagataaaagagattttaaaaaactttttagcgatcaagat
ttttgcccagatgaattaaaaatctatccttgttctctgatcgagactgctgagctaatg
agatattacaaaaaaggtttgtggaaaccatatacccacgaagaattattagaaattact
gccttcactttgactcatactcccgcctattgtcgcatcactagaatgatccgtgatatt
cctgctcaagatattgtggtgggtaatactaagagcaattttagacaaatcgccgaaaat
tacgtcaataaaactaagcaaaaaatgcaagatattcgttcgcgcgaaatccgttcaacc
gtatttgatcctaaggaagtgaagctcaaaattactaattacaaaaccagcatcagccaa
gaaaagtttttgcaatttgtttatggcgataagattctagccttcttgcgtttgagttta
ccaactgtaaaaaagaatgaggtcatcgaagaactcgacggtgccgcgatgatcagagaa
attcacgtctatggtcgtagtttatctatcgggcaaaaaggtgaagaaaaagctcagcat
tttggttttggcaaaaaacttattctcaaagcagcagagattagcaagaaagaaggctat
caaaaactagccgtcatctcagcgattggcacaaaagaatattatagaaaacgaggtttt
agcgacggcgagctttatcagtttttggagctttga
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