Thiomicrospira microaerophila: JX580_00730
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Entry
JX580_00730 CDS
T08259
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmh03016
]
JX580_00730 (truD)
Enzymes [BR:
tmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JX580_00730 (truD)
Transfer RNA biogenesis [BR:
tmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JX580_00730 (truD)
Prokaryotic type
JX580_00730 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UQB42474
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All DBs
Position
142575..143591
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AA seq
338 aa
AA seq
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MHVLNLPYAYGKPTATAKLKQHNHDFIVEEQIAFELSGEGEHLWVWLEKEGENTDWAAQQ
LAKWAGIRLRDIGYAGLKDRHAVTRQWFSLYLPGRADPDLQDFVFDTMRIVKSIRHKRKL
QTGGLSGNRFILTLSEVKGDRAELEARLENIKHLGVPNYFGEQRFGRNEHNLVMAQRLFN
GELTRLKPAQRGLYISSARSYLFNLILAERVNQACWNKALTGDVFQLEGSDKWFVDDAEE
RLAQRVTECDIHPTGALVGTGDLPSMSEVKALEQKVLLKHQAWLEALEALGLKQDRRALR
VIPKDMTWRWLGSDRLELAFSLRPGAYATMVVREGANV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttttaaatctaccctatgcttatggcaaaccaaccgcgaccgcaaaactaaag
caacataaccatgattttattgtcgaggaacagattgccttcgaactcagtggcgaagga
gagcacctatgggtttggttagagaaggagggtgaaaataccgattgggccgcgcagcaa
ttggctaaatgggcgggcatacgtttgcgtgatattggttatgcgggcttaaaggaccgt
catgcagtgacccgccagtggtttagtctttatttgccgggtagagcagatccagacttg
caagattttgtctttgataccatgagaatagtgaaatctattaggcataaacgcaagctc
caaaccggtggcttgagtggaaaccggtttatcttaacgttaagcgaagtcaagggtgat
agggctgagttggaggcgcgactcgaaaatatcaaacatttgggggtgccgaattatttt
ggtgagcagcgatttggtcgaaatgaacacaatcttgtgatggcacagcgtttgtttaat
ggtgagttaacgcgcctaaagccggcacaaagaggtttgtatatttcttcggcgcgttct
tatttgttcaacttaattcttgctgagcgtgtaaaccaggcctgctggaataaagcactg
actggggatgtatttcagcttgagggttcagataagtggtttgtcgatgatgcagaggag
cgtttggcgcagcgtgtcactgaatgcgatattcacccaactggcgcattggtcggaaca
ggggatttgccaagcatgtccgaggttaaggcgttagagcaaaaagttttgctaaagcac
caggcctggttggaggcattagaggccttaggtttgaagcaagatcgtcgcgcattacgt
gttattcccaaggatatgacttggcgttggcttggttctgatcggctggaattggcgttt
agtcttcggccgggagcctatgccaccatggttgtcagggagggtgcaaatgtataa
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