Thiomicrospira microaerophila: JX580_01280
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Entry
JX580_01280 CDS
T08259
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_01280
Enzymes [BR:
tmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JX580_01280
DNA repair and recombination proteins [BR:
tmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JX580_01280
Prokaryotic type
JX580_01280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UQB42557
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All DBs
Position
complement(257905..259347)
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AA seq
480 aa
AA seq
DB search
MTHLIWLQRDLRLADHAPLFKALQRQHKVVIAYIHDPKLTIGDANTAWLAHSLSQLQQSI
AAKGGDLLMLEGDFEACFEQIIQKYTIEQVSYHYEVGQPFKQQQDLALQLCKKHKVGLQP
FDQAWLPADQVLSQKGGTYSVFTPFYKKLLTLLNQVALPLNAPQDLSACKLEQPSALPAD
LIKVSQQPWAIKMLAHWSTAEDTLAVGEKAAWLRFESFLHHDCNDYPDNRDFPSQSATSQ
LSTHLQFGEISMRQMLYALQAAKSNPDYKIHALDIFIRQLAWREFGRYLLHFHPQLETEP
FQAKFAHFPWDDRPDLLVSWQMGKTGFPIIDAGMRELWHTGWMHNRVRMLVASWLTKNAN
HSWRDGQAWFAHTLIDADPANNAMGWQWVAGCGVDAAPYYRLFNPVVQSEKFDIHAEYIK
RWVPELKNLPARYCHAPWLHQASLEQYGFKLGKHYPKPQLDLQQSRAEHLQRVEANKNYT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatttaatttggttacaacgtgatctcaggcttgcggatcatgcgccacttttt
aaggcattacaacgccaacataaagtggttattgcttatattcatgatcctaagctcact
attggtgatgcaaacacggcttggctggcgcacagtttaagccaacttcagcagtcgatt
gccgctaaaggtggcgacttattaatgcttgagggtgactttgaagcttgttttgagcaa
ataatacaaaaatacacgatagaacaagtcagctaccattacgaagtcggccaacctttt
aagcaacaacaggaccttgcattgcagctgtgcaaaaagcataaagtgggtttacaacct
ttcgaccaggcctggttgcccgctgaccaggtgctttcgcagaaaggcggcacctattct
gtttttacacctttttataaaaaactccttacactgcttaatcaggttgctttgccctta
aacgcacctcaagacttatcggcttgcaaactcgaacagcccagcgctttgccggctgat
ttgattaaagtaagtcaacaaccctgggcaataaaaatgttagctcactggtcaacagcg
gaagatactttagcggtgggtgaaaaagctgcttggttaagatttgagtcatttcttcac
catgattgcaatgattacccggataaccgcgattttccatcacaatcggctacaagccaa
ttatccacgcatttacagtttggtgaaatttcgatgcgccaaatgctatatgctttgcaa
gccgccaagtccaaccctgattacaaaattcatgcactggatatttttattcgccaactg
gcctggcgtgaatttgggcgttatttattacattttcatccccaacttgaaacggaaccc
tttcaggcgaagtttgcgcattttccttgggatgatcgacccgatttattagtttcatgg
caaatgggtaaaaccggctttccgattatcgatgccggcatgcgcgaactctggcataca
ggctggatgcacaatcgagtacgcatgctggtggcctcatggttaaccaaaaacgccaat
cattcttggcgtgatggccaggcctggtttgctcatacactgattgatgctgatcctgca
aacaatgccatgggttggcaatgggttgctggctgcggcgttgatgcagccccctactac
agattattcaaccctgtagtgcaaagtgagaaatttgatatccatgctgaatatattaaa
cgctgggttccagaacttaaaaacctacccgctcgctattgccatgccccttggttacac
caagcaagccttgagcaatacggctttaagctgggtaagcattacccgaaaccacaactc
gatttacaacaaagtcgagcagaacacctgcaacgtgtagaagcgaacaaaaactatact
taa
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