Thiomicrospira microaerophila: JX580_01560
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Entry
JX580_01560 CDS
T08259
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_01560
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_01560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DEC-1_N
DUF6934
DeoRC
Motif
Other DBs
NCBI-ProteinID:
UQB42608
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All DBs
Position
328228..328869
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AA seq
213 aa
AA seq
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MKLTIVAVTTLGLLGLSAAHASSSAIPHENNPGYVWDTQGNVVRDGFGGCVRSINWSIET
AIPRCEGIVEPEKVVEKPKPVVAPVVAPKPAPVVAEPAVVIPEKSVVNYKFDNANFDQAT
GVTGNLNAIAEFAKANPNATVVISGHTCTMGPRAYNEALAKNRANAVQAHLVFRGVPAKQ
IQTAGYAYDKPVASNDTEQGRAQNRRAEVEIKQ
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgacaattgttgctgttacaacgctaggtttattgggtttaagtgcggctcat
gcaagttctagtgcgattccgcatgagaataatcctggttacgtatgggatacgcaaggt
aatgtagtgcgtgatggttttggtggctgtgttagaagtattaactggtctattgagacg
gcaattcctcgttgtgaagggattgttgagcctgagaaggtagttgaaaagcctaagccg
gttgtggctcctgtggtcgcacctaagcctgcgccagttgttgctgaacctgccgtagtt
attccagagaagtctgtggttaattataagtttgataatgctaactttgatcaggctact
ggggttactggtaacctaaatgcgattgctgaatttgctaaagcaaatccgaacgcaacg
gttgtgattagtggtcatacttgtacaatggggcctcgtgcatacaatgaagccttagct
aaaaaccgtgcgaatgcagtgcaagcgcatcttgttttccgtggtgtacctgccaagcaa
attcaaactgcgggctatgcttatgataagccagtagcaagtaatgatactgaacagggt
cgtgcgcaaaaccgccgtgctgaagttgaaattaagcagtaa
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