Thiomicrospira microaerophila: JX580_01720
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Entry
JX580_01720 CDS
T08259
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00470
D-Amino acid metabolism
tmh00550
Peptidoglycan biosynthesis
tmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JX580_01720 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JX580_01720 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
JX580_01720 (murD)
Enzymes [BR:
tmh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JX580_01720 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
Precursor biosynthesis
Amino acid ligase
JX580_01720 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UQB42637
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Position
358038..359399
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AA seq
453 aa
AA seq
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MNLVVGLGLTGQSVLSYLTSAGEPMLAFDTREDFRAPQLEQNYPAVKFAYGTLPNTWKKK
ISRIILSPGVARTEAWIASFEASGVEVIGDIELFARAASKPIIAITGSNGKSTVTTLVSE
LLQQAGFQVGMGGNIGRPALDLLLDPLDYDLYVLELSSFQLETTYSLHSLSSVVLNISED
HMDRYPSLDAYIQAKTKIYNDTELAVLPKGHASDFWVTRQTKKVYFGLEHPQSEQDYGVV
LQDNQAWLSRGSRPLVKVSDMLLNAPHYQLNALAAIALCQDYDLSEEVFTDVLSRFRGLA
HRTQWVATHHGVSWIDDSKGTNVGATLTAIQSLGYQAQQQGGKLILLAGGVGKGADFSPL
ASSLNQYAKQLVLFGRDQHLIEQALTTELDGEILMSCTQTLEQAVAVAKQNAVSGDIVLL
SPACASFDQFENYHDRGEKFAAWVKQALELDRV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttagtggtaggcttaggcttaacgggtcaatcggtattgagttatctaacatca
gccggtgaacccatgttggcatttgatacgcgagaagattttcgtgcaccgcagttggag
cagaattatccagccgtcaagtttgcctatggaacgctgcctaatacgtggaaaaaaaag
atttcgcgcattatcctcagcccaggtgtagcaagaacagaggcatggatagcttccttt
gaagcgtccggagttgaagtcatcggtgatatagagttgtttgctcgcgctgcaagtaaa
cctattattgcaattaccggatcaaacggtaaaagcaccgtcactacgctggtttcagaa
ctcttgcaacaggccggctttcaggtaggcatgggtggaaacattggtcgtccggctttg
gatctattgttagacccattggactatgatctttatgtgttagaactttctagttttcaa
ctggaaaccacctactcattacatagtctttcatcggtggttttaaatatcagtgaagac
catatggatcgttaccctagcttagatgcttatattcaagctaaaactaagatttataac
gacacagagctagcggttttacctaaaggccatgcttctgatttttgggtcacgcgtcaa
actaaaaaagtctatttcggcctagagcacccccaatcggagcaagactatggtgtggtt
ctgcaagataaccaggcctggttgtcacgaggtagtcgtcctttagtaaaggtttcggat
atgttattgaatgcgccccactatcaacttaacgcattggcggctatagccttgtgtcaa
gactatgacttgtctgaagaagttttcacggacgtattatctcgatttagaggtttggcg
catcgtactcagtgggtggcgacccatcatggcgttagctggattgatgactcgaaaggt
acgaatgtaggtgcaactttaacagcgatacagagtttaggttatcaagcgcagcaacag
ggcgggaaactcattttacttgcaggcggcgtgggtaagggcgcagatttttcgcctttg
gcatccagtctcaatcagtatgctaaacagttggtactatttggtcgagatcagcattta
attgaacaagctttaactactgagttagatggtgagattttaatgtcttgtacacaaact
ttagagcaggccgttgcggttgcaaagcaaaatgcggtgtcaggggatatcgttttgttg
tcaccggcttgcgcaagttttgaccaatttgagaactatcatgaccggggtgagaagttt
gcagcttgggtaaagcaagcgctggagcttgatcgagtatga
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