Thiomicrospira microaerophila: JX580_02050
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Entry
JX580_02050 CDS
T08259
Name
(GenBank) DUF3393 domain-containing protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
JX580_02050
Enzymes [BR:
tmh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JX580_02050
Peptidoglycan biosynthesis and degradation proteins [BR:
tmh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JX580_02050
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Gene cluster
GFIT
Motif
Pfam:
SLT
Mltc_N
SLT_4
Motif
Other DBs
NCBI-ProteinID:
UQB42701
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Position
433249..434556
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AA seq
435 aa
AA seq
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MKFEHFIMVLLLPAGLLLVAGGAAFQHFQHWALADVQASSPRESSFELVEQTVYASDTLS
SPEVLLTPLPALNAFSKVLEQPIKAVSEVGISSSSEQSGFLSLDKAKNITQPGLVEVLTE
NSTGVVVANLTEASTEKPPSLFASFKLEANQLAFWFPKTLASEQNIKRGIARILLSGQPF
NELDILTLAPLEMRERPFFYRRVFDDKGRAIRYPFDAFKYIDYLLSHDTYTTKTEQGITV
TIPLVASNIAAPAQFYEPWVMQFSADFNVSPALVFAVMETESHFNPTAVSRSNALGLMQI
KAQSAGRDVYKLVDFRMDAPSPDELFDPKTNIRIGTAYLSLLKYDYFGLIRNEEVREMIA
ISSYNGGLSTVWRLFGDTPEAAIAQINQMNPRLVYRKLRYDHPSDETRRYLDKVLQAKQR
YQALLGDDARLLASR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgagcattttattatggtgttgctattgcctgccggtctgctgttagtagca
ggaggcgcggcttttcagcactttcagcattgggcgctggccgatgtacaggcgtcttcg
ccgcgcgaatcatctttcgagcttgtagaacagacagtgtatgcttcagataccctatca
tcacctgaggttttgttaacccctttaccggctttgaatgctttttcaaaagtgttggaa
caacccatcaaggctgtttcagaggttgggatttcatccagctctgagcagagtggtttt
ttatcgttggataaagccaagaacataacacaaccaggcctggttgaggttttaacggaa
aattcgactggcgttgttgttgcgaatttaactgaagcttcgactgaaaaaccgccaagc
ttgtttgccagttttaaacttgaagcaaaccagttggctttttggtttccaaaaacctta
gcttcggaacaaaatataaaacggggtattgcgcgtattctgttaagcgggcagccgttt
aatgaattggatatattgactttggcgcctttggagatgcgtgagcgcccatttttttat
cgtcgggtatttgacgataagggtcgagcgatacgttatccttttgatgcattcaaatat
atagactatcttttgtcgcacgatacctatacaaccaaaactgagcagggcataaccgtc
actattccgttggtggcgtctaatattgccgctcccgcgcagttttatgaaccctgggtc
atgcaattttcggccgattttaatgtttcacctgcgttggtgtttgcagtaatggaaacc
gagagtcattttaatccgaccgcagttagtcggtcgaatgcattgggtttaatgcaaatt
aaagcacaatcggcagggcgagatgtctataaattggtcgatttccgaatggatgcgccg
tcacctgatgagttatttgaccccaaaaccaatattcgcatcggcacggcgtacttgtct
ttgttaaagtatgattactttggtttgattcgtaatgaagaggtgcgggaaatgatcgcg
atatcctcttacaatggcgggctatcgacagtttggcgtctgtttggtgacactccggaa
gcggcgatcgctcaaattaatcaaatgaatcctcggttggtttatcgcaaactgcgttat
gatcatccttcagacgaaacacgacgttatttggataaagttttacaagcgaaacagcgc
tatcaggcgcttttaggtgatgatgcgcgactgctggccagtcggtaa
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