Thiomicrospira microaerophila: JX580_03345
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Entry
JX580_03345 CDS
T08259
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_03345 (radA)
DNA repair and recombination proteins [BR:
tmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JX580_03345 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
SLFN-g3_helicase
GvpD_P-loop
Rad51
AAA
DUF7125
AAA_22
AAA_16
nSTAND3
PAXNEB
ABC_tran
RecA
AAA_24
GvpD_bR2
divDNAB
AAA_14
TIP49
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
UQB42939
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Position
677678..679045
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AA seq
455 aa
AA seq
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MAKIKSVFVCTECGGEHTKWQGQCADCGEWNTLKELKLSAASKSSSRTATSYSGTRSNKV
LSVQDIELSEVPRFTTGMNELDRVLGGGIVPGSVVLIGGDPGVGKSSILLQVMCGLSQTM
PVLYVTGEESLQQVVLRAQRMQLPQDKLRLLAETDVEHIMSFAQQESPKVMVVDSIQTMQ
LAELGTAAGGVTQVRESAAFLTRFAKQHNIAVFLVGHVTKSGEVAGPRVLEHIVDSVLFL
EGQSDSRYRTLRAMKNRFGAVNELGVFAMTELGLKQIKNPSAIFLSRGSEAAAGSVVMVL
WEGSRPLLVELQALVDESPYGSPRRVCVGLDSNRIAMLLAVMHRHGGVQAADQDVYVNVV
GGIKVTETSADLAVLIAILSSLRNKPLEQDWFVFGEVGLSGEIRPVPSGQERIFEAAKHG
FKRALVPSANVPKGGVPGLEIVGVQNLAQALAELN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaataaaatctgtatttgtttgtactgaatgtggtggagagcatactaaatgg
caaggccagtgcgctgattgcggtgagtggaacactcttaaagagcttaaacttagtgct
gcttcaaagtcttcatcgcgaacagcaacaagttatagtggtacgcgttcgaataaagtt
ttatctgttcaggatattgaactttctgaagtgccacgttttaccaccggtatgaatgaa
ttagatcgggttttaggtggtgggattgttccaggctctgtagttctaattggcggtgac
ccgggtgtgggtaaatcatcaatcttattgcaagtcatgtgtggtttaagtcaaactatg
cctgtgttatatgtcacgggtgaggaatcacttcagcaagtagtcctgcgagcacaacgt
atgcaactgcctcaagataaacttaggctgttggctgaaaccgatgttgagcatattatg
agtttcgcgcaacaagaatcaccaaaggttatggtggttgactcgattcaaactatgcag
ttggctgaactaggtactgctgctggtggagtaacgcaagtgcgggaatctgcagccttt
ttaactcgatttgctaaacaacacaacatagctgttttcctcgttgggcacgtcactaag
tccggagaagttgctggcccacgcgttttggaacatatcgttgatagtgttttattttta
gagggtcaatcggatagtcgttaccgtaccttgcgagcgatgaaaaaccggtttggagcc
gtaaatgagttgggggtatttgcaatgactgaactaggtttaaagcaaattaaaaacccc
tctgctatttttttatctcgcggatcagaagcagcagctggttcagtggttatggtgttg
tgggagggctctcgtccattgcttgttgagctgcaagctttagttgatgagtcgccctat
ggcagtccgcgtcgtgtatgcgttggtttagactcaaatagaattgctatgttactggct
gtaatgcatcgacatgggggtgttcaagctgctgatcaagatgtttatgttaatgtagtg
ggcggcataaaggttacggaaaccagtgctgatttagcagtgctgattgctattttatca
agcctaagaaataaacccttggagcaagactggtttgtttttggagaagtgggtttgtcg
ggcgagatacgtcctgtcccaagtggtcaagaacgcatttttgaggctgcaaagcatggg
tttaaacgcgctttggttccttctgcaaatgttcctaaaggtggagttccgggcttggaa
atagtgggtgtacaaaaccttgctcaggcattagctgaattgaactaa
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