Thiomicrospira microaerophila: JX580_03405
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Entry
JX580_03405 CDS
T08259
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JX580_03405 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_03405 (msbA)
Enzymes [BR:
tmh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JX580_03405 (msbA)
Transporters [BR:
tmh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JX580_03405 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
nSTAND3
AAA_22
RsgA_GTPase
AAA_29
Lactamase_B_5
ABC_ATPase
AAA
AAA_30
AAA_23
AAA_21
AAA_33
MMR_HSR1
DUF815
DEAD
AAA_25
nSTAND1
NACHT
Motif
Other DBs
NCBI-ProteinID:
UQB42950
LinkDB
All DBs
Position
complement(689203..690960)
Genome browser
AA seq
585 aa
AA seq
DB search
MPSTSNALVKTWPLYKRLLGYIRPYKAMIAVTILALLVIAITEPAMAAILKELVDKSMIE
QDPDSFILLPLMLVGIFFIKGVGEYVSKVSSQWIAERAILNIRNDMYQKMQYLPMQEFSR
YSVGQLMSKITYDVQQTSNALSQAWIVLIRDSLILIALLAYMLYISIYLTLFMLIVGPIL
GLIIRQASKKMRKHSRSMQGNMGQMTHCLEEGLVGHKEIKIYNAENYEQQRFNHSAEQLF
KNTMRVTRVSALNSPLVLFIGSIALAGVIFVAMKLSSFQQLTPGELLSYITAMALTFAPL
KRLTNINIIVQKGMAAAESIFALLDSPIEENQGQLKPKIKGKIQFKSVNFSYPNSSHPAL
QNFNLTFPANQTTALVGHSGSGKSTLVNLIARFYPIEQGQILIDNYEISQLDLAYLRSKI
GFVSQQVVLFNDTIRANIAYGHQEFNEQAIIDAAKSAHAWEFIEKLPEGLNTQVGENGAN
LSGGQRQRIALARAFLKNAPILILDEATSALDNQSEALIQQAMDKLRQNRTVIIIAHRLT
TIESADQIAVIDQGELVELGNHADLMSLNGYYARLHQQGDGHESA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccttccacctccaacgcactggttaaaacctggcctctttacaagcggcttctaggc
tacatacgcccttacaaagctatgattgctgttacgattttagcgctgctagtcattgcc
attactgagcccgcaatggcagccattttaaaagagctggtcgataaaagcatgatagag
caggaccctgacagctttatactcctgccgttaatgttagtaggtatcttttttatcaag
ggcgttggcgaatatgtttcaaaagtaagcagtcagtggattgctgaacgcgccatatta
aatattcgtaatgacatgtatcaaaaaatgcaatatttgcccatgcaagaattttcgcgc
tactcagttgggcaactgatgtcaaagatcacctatgacgtgcaacaaacaagtaatgcg
ctgtctcaagcctggatagttttaattcgtgacagcttaatcctgatcgctcttttagcc
tatatgctttatatatctatttacttgactttatttatgcttatagtcggcccaatactt
gggttaattatccgccaagccagtaaaaaaatgcgtaaacatagtcgaagcatgcaaggc
aatatgggacaaatgactcattgccttgaagagggactggttggtcacaaagaaattaaa
atctataatgctgaaaactatgaacagcagcgtttcaatcattcggcagaacaactgttt
aaaaataccatgcgtgtaacccgggtttcagcactcaactcacctcttgtactatttatt
ggctcgattgcgcttgcaggcgttatttttgtcgcaatgaagctatcaagttttcaacaa
cttacccccggtgaattgctatcctacattaccgcaatggccttaacctttgcaccgctt
aaacgtctcaccaatattaacatcatcgttcaaaaaggcatggccgctgcggaaagcatt
tttgcattactcgatagccctattgaagaaaaccaaggccagcttaaacctaaaataaaa
gggaaaattcaatttaaatcagtgaactttagctatcctaatagctcccaccccgcttta
caaaacttcaacctgacttttcctgcaaaccaaactacagcattagttgggcattctgga
agcggtaaaagtacactagttaacctgatcgcacgattctacccgattgagcaagggcaa
attttgattgataactatgaaataagccaactggatcttgcctatctccgaagcaaaatc
ggctttgttagccaacaagtggtcttatttaacgatactattcgagccaacatcgcctac
ggccatcaagaatttaacgaacaagccattatcgacgcagctaaatcggcacatgcttgg
gaatttattgaaaaacttccggaagggctcaatactcaagtaggtgaaaatggcgcaaat
ctctcaggtggccaacgccagcgcatagcacttgctcgggcttttttaaaaaatgcaccc
attttgattttagacgaagccacttctgctctagacaatcaaagtgaagccttaattcaa
caagcaatggataagttacgtcaaaatcgcaccgttattattattgcccaccgattaaca
accatagaaagcgctgatcaaattgctgtgattgatcagggagagcttgtggaactgggt
aaccatgctgatttaatgtctctaaacggatactatgcacgcctccatcaacaaggagat
ggtcatgagagcgcatga
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