Thiomicrospira microaerophila: JX580_03590
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Entry
JX580_03590 CDS
T08259
Name
(GenBank) AAA family ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh03030
DNA replication
tmh03430
Mismatch repair
tmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JX580_03590
03430 Mismatch repair
JX580_03590
03440 Homologous recombination
JX580_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmh03032
]
JX580_03590
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_03590
Enzymes [BR:
tmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JX580_03590
DNA replication proteins [BR:
tmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JX580_03590
DNA repair and recombination proteins [BR:
tmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JX580_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
HolB_lid
AAA_2
TsaE
DUF2861
zf-CXXC
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UQB42985
LinkDB
All DBs
Position
723397..724365
Genome browser
AA seq
322 aa
AA seq
DB search
MIYPWQQDQWQSWLAQFERLGHAYLLTGSTGLGLTVFAQTMAQSLFCQRHDACGQCSGCR
QFLERNHIDFFQLEVLEGKKEVGVEQVRQLTQKLMQTSYHGGYKVALLPEVERFNTSAFN
ALLKTLEEPPQQTLLILTSYQRDRLPATIVSRCQQIAFSAPVLAESEAWLAQQIQNLSPQ
LCKRALRLNWGAPLAALDWLNNQAWLLDEAWQANLTELVKGQTTPSNCAGVWLKWPCPEK
VFDQFYLLSVNAIRRGFYQQQPLNPNWFSFQQQILQAKLDWQGNANKELLLESLCLLYLA
LQSDNSLTIPTIFTDTRIRGRL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatctatccttggcaacaagatcagtggcaaagctggttggcgcagtttgaacgtttg
ggtcatgcttatttgcttacaggttcaacgggtttgggtttaacggtgtttgcgcagact
atggcgcaatctttgttttgccaacggcatgatgcgtgtggtcagtgttcgggttgtcgt
cagtttttagagcgaaaccatattgatttttttcaacttgaggtgcttgaaggcaagaag
gaagtcggggtcgagcaggtacgtcaattgacacaaaaattgatgcagacttcttatcat
ggtggatataaagtagcgctattgcctgaggttgagcgttttaatacgtctgcttttaat
gcactgctaaaaacgctggaagagccacctcagcaaacattgttgattttaaccagttat
cagcgtgatcgtttaccggctactattgtcagtcgttgccaacagatcgcgtttagcgcc
cctgttttggctgaaagtgaagcttggttagcacaacaaattcaaaatttatcccctcag
ctttgtaaacgggctttacgtttgaattggggtgcgcctttagcggctttagattggcta
aataaccaggcctggttgttggatgaggcttggcaagcgaatttaaccgaattggttaag
gggcagacaacgccttcaaactgtgcgggtgtttggttaaagtggccttgtccagaaaag
gtgtttgatcagttttatttattgagcgtcaacgccattcggagaggtttttatcagcag
caacctcttaatccgaactggtttagttttcagcagcaaattttacaggccaagctcgat
tggcagggtaatgcgaataaggagttgttgttggagtcattatgtttactttatttggcg
ctacaatctgataattcgttaactattcccactatttttaccgatacaagaataagagga
aggctttaa
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