Thiomicrospira microaerophila: JX580_04050
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Entry
JX580_04050 CDS
T08259
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tmh03110
]
JX580_04050 (clpB)
Chaperones and folding catalysts [BR:
tmh03110
]
Heat shock proteins
HSP100
JX580_04050 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
AAA_14
IstB_IS21
nSTAND3
TniB
bpMoxR
RuvB_N
AAA_7
ATPase_2
AAA_24
NACHT
NBD_SMAX1
AAA_25
ResIII
Zeta_toxin
DNA_pol3_delta2
AAA_19
T2SSE
AIF-MLS
Cob_adeno_trans
Motif
Other DBs
NCBI-ProteinID:
UQB43062
LinkDB
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Position
835679..838246
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AA seq
855 aa
AA seq
DB search
MMDKFTTQFQAVLAQAQSLANSQDNQFIEPMHILASLLPEQGHLLRLAGVDVNSLNQTLQ
TKLKTLPQVSGTGGDVQISRQTGAILNLMEKQAQKNGDSYISSELFFKAALESKDQVTEI
LKQAGATENKLAQAIEQVRGGEKVQDQNAESTRQALEKYTIDLTARAESGKLDPVIGRDD
EIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRNKRVLSLDLGAL
LAGAKYRGEFEERLKAVLKDLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPALAR
GELHCIGATTLNEYRDNIEKDAALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAI
TDPAIVAAARLSQRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDKLDRRLIQLKME
QVALKKEKDEASKKRLDILKDQIKELEKQYSDFEEVWKKDKAKLQGAQQYKEALDKARTE
MEVARREGNLARMSELQYGVIPDLEAKIKAADELEMTDGKSEMHLLRNKVSEEEIAEVVS
RWTGIPVSRMMEGEREKLLRMEDSLSARVVGQAEAVQAVSDAIRRSRAGLSDPNKPNGSF
LFLGPTGVGKTELTKSLADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGY
LTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLG
SQIIQELSGENNYDAMKSAVMEVVGGHFRPEFVNRIDDIVVFHPLGKGQIRAITDIQLES
LRQRLTDIDLKIEVSIPALDVLGEAGFDPVYGARPLKRVIQQRLENPLAQRILKGEFQPG
STIHVELEDGELNFH
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgatggataagtttacaacccaatttcaggcggttttagctcaagctcagtcattagcg
aatagccaagataatcagtttattgagcctatgcatattctagcgagtttattacctgaa
caggggcatttattacgtctggcaggggtggatgtcaatagtctcaaccaaaccctgcaa
accaagttaaaaaccttgccgcaggtttccggcaccggcggcgatgtgcagatttcgcgt
caaaccggcgcgattttgaatttaatggaaaaacaagcgcagaaaaatggcgacagctat
atttcaagtgagttgtttttcaaagcggctttggagtcgaaagatcaagtaacagagata
ttaaaacaagctggcgcgaccgagaataaactcgcgcaggcgattgaacaagtccgagga
ggcgaaaaagtgcaagatcaaaatgcagaatccacgcgtcaagcgttggaaaaatacacc
attgacttaaccgcgcgcgccgagtcgggcaaactcgatccggtgattggccgtgacgac
gaaattcgccgtgcgattcaggttctgcaacgccgcaccaaaaacaatccggtgttaatt
ggtgagccaggcgtgggtaaaaccgcgatagtcgaagggttggcgcaacgtattatcaat
ggcgaagtgccggaaggtttgcgtaacaaacgtgttttgtcgctggatttaggcgcgtta
ttagccggtgcaaaataccgtggtgagtttgaagaacgcctcaaagcggtattaaaagac
ctatcgaaaaacgaaggtcaggtgattttgtttatcgatgaaattcatacgatggtgggt
gcgggtaaagccgaaggcgcaatggatgccggcaatatgctcaaaccggcgttggcgcgt
ggtgaactgcattgtatcggcgcgacgacgttaaacgagtaccgcgacaatattgaaaaa
gatgccgcgttagagcgtcgtttccaaaaagtcttggtggacgaaccgactgaagaagac
acgattgcgattttgcgtggcttaaaagaacgttacgaagtgcatcatggggtggcgatt
accgacccagcgattgtggcggcggcgcgcttatcgcaacgctatatcaccgaccgtcaa
ttgccagataaagcgattgatttgatcgacgaagccgcgtcgcgtattcggatggaaatc
gactccaaaccggaagaaatggacaaacttgaccgccgtttaatccagctcaaaatggag
caggtggcgttgaaaaaagagaaagacgaggcctcgaaaaaacgtctggatatcttaaaa
gatcaaatcaaagagctggaaaaacaatattccgattttgaagaggtctggaaaaaagac
aaggccaagttgcagggcgctcagcaatacaaagaagcactcgacaaggcgcgaactgaa
atggaagtggcgcgtcgtgaaggcaacttggcgcgtatgtcagaattgcaatacggtgtg
attccggatttagaagccaaaattaaggcggctgatgagctggaaatgaccgacggcaaa
agcgaaatgcacctattgcgcaacaaggtgtctgaagaagaaattgccgaagttgtgtcg
cgttggacggggattccggtttcgcgcatgatggaaggcgagcgcgaaaaactgttacgt
atggaagattcgttgagcgcgagagttgtggggcaagctgaagcggtgcaagctgtgtcg
gatgcgattcgtcgctcccgcgccggattatctgacccgaacaaacccaatggttcgttc
ttattcctcggcccaacaggggtggggaaaactgagttgaccaaatccttggcggatttc
ctgttcgacagtcaggatgcgattgtgcggttggatatgtcagagtttatggaaaaacac
tcggtcgcgcgtttaattggtgcgccgcctggttatgttggttatgaacagggcggttat
ttaaccgaagccgtgcgtcgcaaaccctattcggtgattttgctggatgaagtcgaaaaa
gcgcatcctgatgtgtttaatatcttgttgcaagtgctggacgacgggcgtttaaccgat
ggccaaggccgcacggtggattttcgcaatacggtgattgtcatgacctcgaatctcggt
tcgcagataatccaagaactgtcgggtgaaaataattacgatgcgatgaagtcagcggtc
atggaagtggtcggtggtcatttccgccccgaattcgttaaccgaattgacgacattgtg
gtattccatccacttggtaaaggacagattcgcgcgattaccgacattcaacttgagagc
ttacgccagcgcttgaccgatattgatttgaaaattgaggtgtcgattccggcgttggat
gtgttaggtgaggctgggtttgatccggtgtacggtgcgcgtccgctaaaacgtgtgatt
cagcagcgtctggagaatccgctcgcgcaacgcattctaaaaggcgagttccaacccggt
tcaactattcatgttgagctggaagacggtgagctcaattttcactag
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