KEGG   Thiomicrospira microaerophila: JX580_04585
Entry
JX580_04585       CDS       T08259                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
tmh  Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tmh03016]
    JX580_04585
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmh02048]
    JX580_04585
Transfer RNA biogenesis [BR:tmh03016]
 Prokaryotic type
  tRNA degradation factors
   JX580_04585
Prokaryotic defense system [BR:tmh02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    JX580_04585
SSDB
Motif
Pfam: PIN DUF5615 DUF4411 PIN_12
Other DBs
NCBI-ProteinID: UQB43159
LinkDB
Position
959951..960370
AA seq 139 aa
MVEASYLLDTNVLSEAVKPQPNQQVLSNLKRNEHLLAIPSLVWHEMRYGWLKMPEGKRKQ
AIGDYLHLVVSQLPVFDYDQPAARVHAEFRAQLEKTGITLSFVDSQIAAIAIANGLTLVT
RNVTDYQAIPNLKMENWFD
NT seq 420 nt   +upstreamnt  +downstreamnt
atggtagaggcgagttatttgctggatacgaatgtattatccgaagccgttaaacctcag
cccaatcagcaggtattgtctaatcttaagcgtaatgaacacttgcttgcgattccaagc
ttggtttggcacgaaatgcgttatggctggctaaaaatgccggagggtaagcgcaagcaa
gcgattggcgattatctgcacttagtggtaagtcaattacctgtttttgattatgaccaa
cccgccgcacgtgttcatgctgaatttagagcgcagcttgaaaaaacaggcatcacgctc
agctttgtcgatagtcaaattgctgctattgcgattgccaatgggctaacacttgtgaca
agaaatgtcacagactatcaagcgataccaaatttaaaaatggagaattggtttgattga

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