Thiomicrospira microaerophila: JX580_04900
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Entry
JX580_04900 CDS
T08259
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JX580_04900 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_04900 (recO)
DNA repair and recombination proteins [BR:
tmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JX580_04900 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JX580_04900 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UQB43219
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All DBs
Position
1031236..1031952
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AA seq
238 aa
AA seq
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MLKHQPAFILHSRPYRETSVLLSLFTPELGKVSASLRGVRSTSKAARQKQAWLQPFQPLL
LNWREGTDAQPDWVKPQNLEPNGSNYGLKADANICGLYLNELLYRLLQPGLGLNELFTQY
QQTLFALSQSNERELMAWHLRQFELALLTELGYGLDLTQDAQGQSIEEAAIYRYQMQTGL
YRIAPDADLSESITGACLLKLANQQFCVGCLSAWKLFLRRVLQPHLGVKPIATRALFN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaccagccggcgtttattttacacagtcggccttatcgcgaaactagcgtg
ttattaagcttgtttacaccggagcttggcaaggttagcgccagtttacgcggggtacgc
tcgacttccaaagccgcgaggcaaaagcaggcctggttgcagccgttccagcccttgttg
ctaaactggcgcgaggggacggatgcccagccggattgggtcaaaccgcaaaatcttgaa
cctaacggtagtaactatggtctaaaagccgatgcgaatatttgtggtttatatctcaat
gaattgctgtatcgtttgttgcaaccaggcctgggattaaatgagttgtttactcagtat
cagcaaaccttgtttgcgctttcgcagtcgaatgagcgtgaattaatggcctggcatttg
cgccaatttgaattagccttgttgacagagttggggtatggcttggatttaacccaagat
gcacaaggtcaatcaattgaagaagcggcgatttatcgctatcagatgcaaaccggatta
tatagaatagcgccagatgctgatttgagcgaaagcattacaggcgcgtgtttgctaaag
ctcgcaaatcaacaattttgtgtcggctgtttgtctgcgtggaaactatttttacgccga
gtattgcaaccccatttaggcgttaagcccatagcaacccgcgcgttatttaactaa
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