Thiomicrospira microaerophila: JX580_05360
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Entry
JX580_05360 CDS
T08259
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JX580_05360 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmh03400
]
JX580_05360 (xseB)
Enzymes [BR:
tmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JX580_05360 (xseB)
DNA repair and recombination proteins [BR:
tmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JX580_05360 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TBCA
DUF3829
DUF4226
Exonuc_VII_L
LprI
Motif
Other DBs
NCBI-ProteinID:
UQB43300
LinkDB
All DBs
Position
complement(1121274..1121495)
Genome browser
AA seq
73 aa
AA seq
DB search
MSKTNKAESFKENYARLQQIANQLMQTDEVDIDQLVPMVDEASRAYQACKSRLDAVEAAL
SQRLEKEETNEPV
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaaacaaagcagaaagcttcaaagaaaactatgcacgactacaacagata
gcgaatcaactgatgcaaaccgatgaggttgacattgatcagctcgtgccaatggtcgat
gaagcaagtcgtgcttatcaggcttgcaaatcaagactggatgcggtcgaagcggcacta
agccaacgtttagaaaaagaggaaaccaacgagccagtctaa
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