Thiomicrospira microaerophila: JX580_06070
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Entry
JX580_06070 CDS
T08259
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmh03009
]
JX580_06070 (rimO)
Enzymes [BR:
tmh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JX580_06070 (rimO)
Ribosome biogenesis [BR:
tmh03009
]
Prokaryotic type
ribosomal protein modification factors
JX580_06070 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
TRAM
DUF5005
Motif
Other DBs
NCBI-ProteinID:
UQB41269
LinkDB
All DBs
Position
complement(1238821..1240152)
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AA seq
443 aa
AA seq
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MSKHQPTVGVVSLGCPKATVDSERILTQLRTEGYHLSNSYEDADTVIVNTCGFIDSAVQE
SLDAIGEALRENGKVIVTGCLGARDEEILKHYPQVLSVSGPQAYETVLNAVHDVVQPPEH
NPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVSDVLDEAKRLV
EAGVQELLVISQDTAAYGVDVKHKLDFWNGQPVKTSMTGLVKALGDMGVWVRLHYVYPYP
NVEEVIPLMAEGKVLPYLDMPLQHADPRVLKAMRRPGNIDKQLERIQQWRQQVPDLTLRS
TFIVGFPGETEEEFQRLLDFLEQAQLDRVGCFQYSPVEGAAANAIAEPVPDEVKQDRYDR
FMQTQQAISAKKMQAKIGKRMMVLVDEVDDEGAIARSAADAPEIDGMVFIPEGDGLQPGD
MLEVEIFAADEYDLWAQPVLADD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacatcagcccacggtgggcgtcgttagtttgggctgccctaaagccacagtg
gattctgaacgaattttaacccagttgcgtacagagggttatcatctatctaattcgtat
gaagatgcagataccgttattgttaatacctgtggttttattgattctgccgtgcaagaa
tcactggatgcgattggtgaagccttgcgtgagaatggtaaggtcatcgtgaccggatgt
ttaggcgctcgcgatgaagaaatcttaaaacactatcctcaagtcctgtcagtttcgggg
ccgcaagcttatgaaaccgtgctgaatgcggtgcatgatgtggttcagccgcctgagcat
aacccttatgttgatcttgtgccgccgcagggtgttaagttaacgccacgtcactatgcg
tatctaaaaatttcagaggggtgtaaccaccgttgttcgttttgtattattccatccatg
cgtggtgatctggtgagtcgtccggtgagcgatgttctggatgaagccaaacgtcttgta
gaagctggggttcaggagttattggttatttctcaggataccgcggcgtatggtgttgat
gtaaaacacaaactggatttttggaatggtcaaccggttaaaacctcgatgaccggcctg
gtaaaggcattgggcgatatgggggtttgggtcaggttgcattatgtttatccctatccg
aacgttgaggaagtgattcctttaatggccgagggtaaggttttgccttatttggatatg
cctttgcaacatgccgatccgcgtgtgcttaaagcgatgcgtcgtccaggaaatattgac
aaacaattggaacggattcagcaatggcgtcaacaggtgccggatttgaccttgcgttcg
acttttattgttggttttcccggtgaaaccgaagaggaatttcagcgcttattggacttt
ttggagcaagctcaacttgaccgagtaggttgttttcaatattcaccggttgagggtgcg
gcagcgaacgcgattgcggagccagtaccggatgaggttaagcaagatcgctatgatcgt
tttatgcaaactcagcaagcaatcagcgctaaaaaaatgcaggccaaaattggcaagcgg
atgatggtattggtggatgaggtagacgatgagggggcaattgcacgttcagcggcagat
gcccctgaaattgacggcatggtgtttatccctgaaggtgatggcttgcagccgggcgac
atgcttgaagttgaaatctttgctgctgatgaatatgatttgtgggctcaaccggtttta
gccgatgattag
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