Thiomicrospira microaerophila: JX580_06175
Help
Entry
JX580_06175 CDS
T08259
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_06175
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF5050
Motif
Other DBs
NCBI-ProteinID:
UQB41289
LinkDB
All DBs
Position
complement(1256851..1258974)
Genome browser
AA seq
707 aa
AA seq
DB search
MTFKLKKIVVSLSLAAPGVFLLTSNAVQADQITSLERISVIQTGSIMSQTESEVVRPVAV
IEGEQMEQRRAGTIGEALDGLPGISNADFGPGVGRPVIRGLQGSRVAVLEDGARVSDVSG
EGADHAVASSTLRADSVEVIRGPATLLYGSGATGGVVNVVSGRFSPIIGDRANGVLQASY
GLNGHDRRSGVALELPVSGEMAVRLDADYRNTDNFAIKGFQTIDGEGKRNELLNSDLESR
NLAITGVYAGERGFLGLGFSQWTSDYGVPEADPDDYDRIEAESKRFDLKGELYDPMPGFN
TARLSLAYTDYKQDEFEYENRVKDSVPEAVFKQQEFDFRLELTHDPIADWIGVMGLDYNQ
TKFEADAAGDSFFIRPSERNAIGVFSMQERPTSWGQFEVGFRLGYDQFKPEAQASSPVED
DSVTFNNPSIGQVNFDSNPGTKSYLNTGIALGALFNLDSEHKLRAGISRSEAAPGPEQLY
AFGRHGAAGTFEIGNPDLTKETYLNTEVSLMRQQGSLRYEATAFVNMVDNFIYYLNDTDA
NGNARRVNKNGQDDPDGELLVYNAQDDAVFYGVELSGAIDLATQLPLTLRASGDYLRGEL
RDGGNLPRMTPPRVGLGADTRWSDVKLSVDYRYHFKQTQTAEAEDATDGFGTLGFDLAYT
PANIKDLRLFLQGRNLTNENGRLHQSFFKNEAPITGRNFTAGVRYQF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttaaacttaaaaaaatagtggtatctctgtcgctggctgcgcctggtgttttt
ttgcttacttctaatgcggttcaagccgatcagataaccagcttggaaagaatttcagtg
attcaaaccggttcgattatgagtcaaacagagagcgaagtggtgcgcccggtcgcggtg
attgaaggcgaacaaatggaacagcgtcgtgccggtacgattggtgaagccctggatggt
ttacctggtattagcaatgcggactttggcccgggtgtggggcgcccggttattcgtggc
ttgcagggttcacgcgttgcggtgttagaagacggggcgcgtgtcagtgatgtgtccggt
gaaggtgccgaccatgccgtagccagctcgaccctgcgcgccgattcagtcgaagtgatt
cgcggccccgccaccttactctatggttcgggagccaccggcggcgtggtgaatgtggta
tccggccgttttagtccgattatcggtgatcgcgccaatggtgtgctgcaagcgtcttat
gggcttaatggccacgaccgacgcagcggggtggccttggagttgccggtgtccggggaa
atggcggtgcgtttagatgccgattatcgcaacaccgacaacttcgctatcaagggtttt
caaacaattgatggcgagggcaaacgtaatgaactgttaaacagtgatcttgaaagccgc
aacttagcgattacgggtgtgtatgccggtgagcgcggttttttgggtctgggttttagt
cagtggaccagtgactatggggtgcctgaagctgatcctgatgactatgatcgcattgag
gcggagtcaaaacgctttgacttaaaaggtgaactctatgatccaatgccggggtttaat
accgctcgactgagtcttgcttacacagactataagcaagatgaatttgagtatgaaaat
cgcgtaaaagatagcgtaccagaagcggtttttaaacaacaagaattcgattttcgcttg
gagctgacccatgatccgattgcggattggatcggggtgatgggtttagattacaaccaa
acaaaatttgaagccgatgccgctggcgacagcttttttattcgtccaagcgaacgcaat
gccatcggtgtgtttagtatgcaagaaagaccgacctcttgggggcaatttgaagtcggc
tttagactgggttacgaccaatttaagcctgaagcgcaagcgtcatcgccggttgaggat
gacagtgtaacctttaataacccttcaattggtcaagttaattttgactcgaatcctggc
acgaaatcttatttaaacaccggcattgctttgggtgcgttatttaacttggacagcgag
cacaagcttcgtgccggcattagtcgctctgaggccgcgcccggcccggaacagctttat
gcctttggccgccacggtgccgcaggtacttttgagatcggcaatccggatttaaccaaa
gaaacctacctaaataccgaagtcagtctgatgcgccaacaaggtagcctgcgctatgaa
gcgacggcgtttgtgaatatggtggataactttatctattatctaaacgacacggatgcc
aacggcaatgcgcgccgtgtaaataaaaatggacaagatgatccagacggtgaactactg
gtctataacgcccaagatgatgcggttttttatggtgtggaactcagcggtgcgatcgac
cttgcgactcaactaccattaaccctgcgtgccagcggtgattatttgcgtggtgagtta
cgtgacggtggcaatctgccgcgcatgaccccgccacgcgttggattaggcgcagacacc
cgttggagtgacgttaaattgagcgtcgattatcgttatcactttaaacaaacccaaaca
gcggaagcggaagacgcgactgatggctttggcacacttggctttgacttagcctatacg
ccggcgaacatcaaagacctgcgtttgttcttacaggggcgcaacctgaccaacgaaaat
ggtcgcttacatcaaagcttctttaaaaacgaagccccaatcaccgggcgtaactttact
gctggtgtgcgttatcagttttaa
DBGET
integrated database retrieval system
