Thiomicrospira microaerophila: JX580_06205
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Entry
JX580_06205 CDS
T08259
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JX580_06205 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tmh01007
]
JX580_06205 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmh03016
]
JX580_06205 (lysS)
Enzymes [BR:
tmh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JX580_06205 (lysS)
Amino acid related enzymes [BR:
tmh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JX580_06205 (lysS)
Transfer RNA biogenesis [BR:
tmh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JX580_06205 (lysS)
Prokaryotic type
Other AARSs
JX580_06205 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UQB41295
LinkDB
All DBs
Position
complement(1264535..1266043)
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AA seq
502 aa
AA seq
DB search
MSEQNTAPELDENKIIAERRAKLDGLRQAGQAYPNTFRRDVLAMDLQNEYGNKTKEELAA
MEPVRVKVAGRMMLRRIMGKASFATLQDMSGRIQAYVMRDELPEGFYNEQFKKWDLGDIV
GVSGYLFKTNTDELSIHVESIELITKSLRPLPDKFHGLQDQEVRYRQRYLDLIMSEQSRK
TFEIRSKVIHGMREFFVRKGFMEVETPMMQVIPGGASAKPFVTHHNALDMPLFLRIAPEL
YLKRLLVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYEAYADYIDMMDYTEEMFKELA
QMVLGSGEVPYQGQVFHFDKPFARITMKDSIALYNEGVKAEDLDDIEYCISLAEKLKIDI
RPGYGLGKIQTEIFEETVEHRLMDPTFITEYPAEVSPLARRNDANPFVTDRFELFIGGRE
LANGFSELNDAEDQAERFMDQVRAKESGDDEAMHYDADFITALEHGMPPAAGQGIGIDRL
VMLFTDAASIKDVLLFPHMRPA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaaaatactgcccctgagttagacgaaaacaaaattattgctgaacgtcgt
gccaaactagacggtttacgtcaagccggtcaggcctatccaaatacctttcgtcgtgat
gtattggcgatggatttacaaaacgaatatggcaataaaaccaaagaagagttagcggcg
atggagccggtgcgtgttaaggtcgcgggtcgcatgatgttgcgtcgaatcatgggcaaa
gccagctttgcaacgctgcaagacatgtctggccgtattcaggcgtatgtaatgcgtgat
gaattaccggaaggcttttataacgagcaatttaaaaaatgggacttaggcgatatcgtc
ggggtgagtggctatctgtttaaaaccaataccgatgaactctctattcatgtagagtcg
attgaattgattaccaagtctttacgcccattgcctgacaagtttcacggattacaagac
caagaagtgcgttatcgtcagcgctatcttgatttgattatgtcagaacaaagccgcaaa
acctttgaaattcgttctaaagtgattcacggtatgcgtgagttttttgtgcgtaaaggt
tttatggaagttgaaacaccgatgatgcaagtgattcctggcggtgcttccgccaagccg
tttgttacccatcataatgcccttgatatgccgttgtttttacgtattgcgccggaactt
tatctcaagcgtttgttagtcgggggctttgaaaaggtatttgaaatcaatcgtaacttc
cgtaacgaaggcctatcgacccgccataatcccgaattcaccatggttgagttttatgaa
gcttatgccgattatatcgacatgatggattacactgaagaaatgttcaaagaattggcg
caaatggtgttgggttcgggtgaagtgccgtatcaaggacaagttttccattttgacaag
ccgtttgcacgcattacgatgaaagattcaattgcgctttataacgagggtgtaaaggct
gaagatttggatgatattgaatattgcatttcgttagcggaaaaactcaaaatagacatc
aggcctggttatggtttaggcaaaattcaaaccgaaatctttgaagaaaccgttgagcat
cgtctaatggatccaactttcatcaccgaatacccggcagaagtttcacctttagcgcgt
cgtaacgatgccaatccgtttgtaaccgatcggtttgaattgtttatcggtggccgtgaa
ttggcgaatggtttctcggaactcaacgatgccgaagatcaagccgagcgttttatggat
caggttcgtgcgaaagaatcgggtgatgatgaagcgatgcattatgatgcggattttatc
accgcgctcgaacacggcatgccaccggcagcggggcagggaatcggtattgatcgttta
gtcatgctatttaccgatgcagccagtattaaggatgtgcttctatttccgcacatgcgc
ccagcgtaa
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