Thiomicrospira microaerophila: JX580_06420
Help
Entry
JX580_06420 CDS
T08259
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
tmh
Thiomicrospira microaerophila
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmh03036
]
JX580_06420 (smc)
Chromosome and associated proteins [BR:
tmh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JX580_06420 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
DUF4200
BLOC1_2
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UQB41334
LinkDB
All DBs
Position
complement(1309092..1312574)
Genome browser
AA seq
1160 aa
AA seq
DB search
MRLKLIKIAGFKSFVEPTKLVLASELVGVVGPNGCGKSNTLDAVRWVMGESSARELRGGD
MNDVLFNGSDKRKAVSQCSVELVFDNESGQASGAYASYSEISVKRVHHREEGTRYFLNQQ
PCRRRDIIDLFNGTGLGPRSYALIGQGNISRIIEAKPEDMRIYLEEVAGIGPYRSRRKET
LIRLTRTRENLAQLNVLQEALNEQQNHLAIQAEKALDYRQARQRQQALEKTLYYLQWHRL
HQQQTRTQSDLRLAERHFAESKAQWDQAQKAWLLLRQQQAGLVKELEACETGFHQLDKQV
EKLEQQHLFSDKQSQQWLDQQTLNLQQTEMHQSQLTALRQQQDDLMLELEAIDEQRDQTQ
DQTEILLSRWEGLSSEKTKQEQALQQVQQLALQLEQRFKQVQQQLQSLTQTQTHLTEQRQ
LIEQHSASPQSDHQAERLLELGAQYQTANTSLLDCQQRLADLEQTIQQGRQNLNRLAESR
DTILSQQAEYRAEYQALSRLQSSLVSNSETKDQPALADAQPLIEQLQVDDEWQLAVEAWL
GARLQGVLLPSPRLWDSLQWPENWCLVGWNPPDFEVHPQSLAAQIQQPSLIRYLAAELFV
RDESLSIEQQLVELDVLGYHQAWLIDKSGRLFSKYLCWPPLRSNLTGSLERQNRISFLDN
EINNLDSKLKIAYEEFQQAKAAVLELEVELSSQLEKQYQQQRQLDKLTDQIEHAQGLQQA
LQKQQQASQQTLDVLIARQQKLEQQALDLDAELEAINAELEPLDDQEEALIQKLNQTLAR
LQPIEREREVILLQQQRLDQQYHQQQQLKQQVHFQLNQLQQQLKQDQLQADLIARHLSQT
EPVDQQALASLREQRQKLEAERDGFKQVLLKLNSELEQAEQQAEQSQKWHHQSEQNLVTQ
QLQLQSVQQQIHQLQKTVESEGLSFYQLAQLRFDEQPLEQVEAELKQVKLHLSRLGAVNM
TAIEEFEQVKIKLDELNRQLEDLVQSIDVLEQAIAHIDQDSRQRLLETFEQVNQGFKQLF
PQLFRGGEAQLSWLDPSQDPLEGGLVVMARPPGKRNSRIQLLSGGEKTLSALALIFAIFE
LKPAPFCILDEVDAPLDDSNVIRFCGLVRSLSEKVQFIFITHNKTTMALAKHLVGVTMHE
PGVSRLVSVDLDAAVEMIGD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaaagttaataaaaattgccggctttaagtcgtttgttgagcccactaaactg
gtgcttgccagtgagcttgtaggcgttgttggacccaatggttgtggaaaatcgaatacc
ctcgatgcagtgcgttgggtgatgggcgagagttcagctcgtgagctgcgtggcggtgac
atgaatgatgtgctgtttaatggcagcgacaagcgtaaggcggtcagccagtgttcagtt
gagctggtttttgacaatgaatcgggccaggcatcgggtgcttacgccagctatagcgaa
atttctgttaagcgcgtacatcaccgagaggagggcacgcgctacttcctcaatcagcaa
ccttgtcgtcgtcgtgacattattgacctttttaatggaacggggcttgggccacgtagc
tatgcgctgattggtcaggggaacattagccgaattattgaggccaaacctgaggacatg
cggatttatctagaagaggtggcagggattggtccctatcgttcgcgtcgaaaagaaacc
ctgattcgcttgacgcgaactcgagaaaacttagcacaattaaatgtattgcaagaagca
ctgaacgagcagcaaaaccatttggctattcaagctgaaaaagcgctggattatcgtcag
gcgcgtcaacgacagcaggctttggaaaaaaccctttattacttgcaatggcatcgtttg
catcaacagcaaacccgaactcagtcagatttaagactagcagaacgtcattttgctgaa
tcgaaagcccagtgggatcaggcgcaaaaggcttggttattattacgccaacaacaagca
ggcctggttaaagaactggaggcctgcgagacagggtttcaccagttagacaagcaggtt
gagaagcttgaacaacagcatttatttagtgataaacaaagtcaacagtggttagaccag
caaacacttaatctacaacaaaccgaaatgcaccaaagtcaattgacagctttgcgtcag
caacaagatgatttgatgttggagttggaagctatcgatgaacaaagagatcaaacccaa
gatcaaactgagattttactttctcgctgggaggggttgagttcagaaaaaaccaagcag
gagcaggctttacagcaagttcaacagcttgcacttcaacttgaacagcgatttaagcag
gttcaacagcaattacaatcattgacacaaacgcaaactcatttaacagaacagcgacag
cttattgaacagcatagcgcttcgccccaatctgatcatcaagccgaacgcttattggaa
ctgggtgcgcaataccaaacagcgaacacgagtcttttagattgtcagcaacgcctagcg
gatttagagcaaactattcagcaagggcggcagaacttgaatcgcttggctgagtcacgt
gacaccatcttgagccagcaggcagaatatcgagctgaatatcaagccttatcacgactt
cagtcaagtctggtctcaaacagtgaaacgaaagatcagccagctttagcggatgctcag
cccctaatcgaacaacttcaggttgatgatgaatggcagcttgcggttgaggcctggtta
ggggctaggttacagggtgtgttgcttccatcacctcgactttgggatagtttgcaatgg
cctgaaaattggtgtttggttggttggaacccacctgactttgaggtgcatcctcagagt
ttagctgctcaaattcaacagcctagtttaattcgttacctggccgcagaattatttgtg
cgtgacgaaagcctgtcaatcgagcagcaattggtcgaattggatgtactgggttaccac
caggcctggttaatcgataaaagcggtagacttttttcaaagtatctctgctggcctccg
ttaaggtctaatttaactggaagcttagagcgtcaaaatagaatttcatttttagacaat
gaaataaataacttggatagtaaacttaaaattgcatatgaagagtttcaacaggcaaaa
gcagccgtgttagagttagaagtcgaattgtcgtcacaacttgaaaaacaataccagcaa
cagcgccaattagataaactcaccgatcaaattgaacatgctcaaggcttgcagcaggcc
ttgcagaaacaacaacaagcgagtcaacaaactctagatgtattgatagcacgtcagcaa
aagctcgaacaacaagcgctagacttggacgctgaacttgaggcgatcaacgctgagctt
gagcctttagatgatcaagaagaagcgttaatccaaaagctcaatcaaacgctagcccgt
ttgcagccgattgaacgtgaacgtgaggttattttgcttcaacagcagaggttggaccaa
caatatcatcaacagcaacaactcaagcaacaggtgcattttcagctgaatcagttgcag
cagcagcttaagcaagatcagctgcaagctgatttgatcgctcgccatctgtcacaaact
gaaccggtagatcagcaggctttggcaagtttgcgggaacaacgtcaaaaattagaagca
gagcgcgatgggttcaaacaggtgttgctaaagttgaatagtgaacttgagcaggctgaa
cagcaggcagagcaaagccaaaaatggcaccatcaatctgaacaaaacttggttacacaa
caactgcagttgcagtcggttcagcagcagattcatcaattgcagaaaacggttgagagt
gagggtttatctttttatcaattggcgcagttgcgctttgatgaacagccacttgaacaa
gtcgaagccgaacttaaacaggtcaaacttcatttaagtcgtttaggtgcggtcaacatg
actgcgattgaggagtttgagcaggttaaaatcaagcttgatgagcttaaccgtcaactt
gaagacctggttcagtcgattgatgtgttggaacaagcgattgcccatatcgatcaagat
agtcgtcaaaggttgctggaaacatttgaacaggttaaccaagggtttaaacagcttttt
cctcagttatttcgtggaggagaggctcagttatcctggttggatccatcgcaagacccg
cttgaaggcggcttagtcgtgatggcccgtccaccaggtaaacgtaacagtcgaattcag
cttttgtcgggtggtgaaaagaccttatctgctttggctttgattttcgcgatctttgaa
ctcaagccggcgccgttttgtattttggatgaagttgatgctcctttggatgattctaat
gttattcgcttctgtggactagtcagaagcctatcagaaaaggtacaattcatatttatt
actcacaataagacgaccatggctttagctaagcacttagtgggtgtcactatgcatgag
cctggcgtgtcgcgtttggttagtgttgatttggatgcggccgttgaaatgataggagat
tag
DBGET
integrated database retrieval system
