Thiomicrospira microaerophila: JX580_06460
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Entry
JX580_06460 CDS
T08259
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JX580_06460
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tmh01007
]
JX580_06460
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmh03016
]
JX580_06460
Enzymes [BR:
tmh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
JX580_06460
Amino acid related enzymes [BR:
tmh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
JX580_06460
Transfer RNA biogenesis [BR:
tmh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JX580_06460
Prokaryotic type
JX580_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
tRNA-synt_1e
DivIC
tRNA-synt_1b
DUF3450
Motif
Other DBs
NCBI-ProteinID:
UQB41342
LinkDB
All DBs
Position
1320409..1323177
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AA seq
922 aa
AA seq
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MDKHFDPTTIEAKWYQTWENAGYFSPNTDSDKAPYCIMIPPPNVTGSLHMGHAFQDTIMD
TLIRLNRMQGKPTLWQPGTDHAGIATQMVVERQLAAKGLSRHDLGRDKFIDEIWKWKAES
GGTITQQLRRLGASPDWSRERFTMDDGLSNAVKEVFVRLHEEGLIYRGKRLVNWDPVLHT
AVSDLEVISEEEQGNMWHLRYPLTNGNGHLVVATTRPETMLGDQAVAVHPEDERYKHLIG
QTITLPLVGREIPIIADDYVDPAFGTGCVKITPAHDFNDYEMGKRHNLPMLNVFTKDAAI
NEEAPGKYQGLDRYEARKQIVADLEALDLVEKIEPHKLMVPRGDRTHAVIEPMLTDQWYV
AVQELAKPAIDAVKNGDIEFVPKNWENTYFEWMNNIQDWCISRQIWWGHRIPAWYDDQGG
VYVGRDEAEVRAKHNLGDRPLHQDDDVLDTWFSSALWTFSTLGWPEQTPELEKFHPTSVL
VTGFDIIFFWVARMIMMTLKFTGQVPFKQVYVHGLVRDAEGQKMSKSKGNVLDPIDLIDG
IDLESLVNKRTYGMMQPEKAAKIEKDTRKQFADGIPAFGTDAMRFTFASLASTGRDIRFD
LNRCEGYRNFCNKLWNATRYVLMNTQGFDTGVDESQPIELSLADRWIVSRLQTLETEVVR
HFEQYRFDMAANLLYEFTWNEYCDWYLELSKPILNKDSSDAAKRGTRRTLVRVLETLLRL
LHPVMPYITEEAWQAVAPLAAKQGKTIMLQPYPEADESKIDLAAEAELDWVKQFIMGVRR
IRSEMDIAPGKPLPVLLSKVSAQDQAWLDNNRLFLMTLAKLESIEVLANETDAPESAMSL
VGEMNILIPMAGLIDKDAELARLDKEISKLKAEFERLNAKLSNESFVSRAPEAVVAKERA
KLDDIQTALSNLEQQYGKIEQL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggataaacatttcgacccaacaacgattgaagccaagtggtatcaaacttgggaaaac
gccggttatttctcacccaataccgactcagacaaagccccctactgcattatgattccg
ccgccgaacgtgaccggcagtttgcacatgggacatgccttccaagacacgattatggat
accctgattcgcctcaatcgtatgcaaggcaaaccgaccctgtggcaaccgggcaccgat
cacgccggtatcgccacccaaatggtggttgagcgccaattggccgccaaaggcttgagt
cgccatgatctaggccgcgacaagtttattgatgaaatctggaaatggaaagccgaatcc
ggcggcactatcacccaacaattgcgccgcttgggtgcctcgcctgactggagccgtgaa
cgctttaccatggacgacggcttatccaacgcggtgaaggaagtatttgtgcgcttgcat
gaagaaggcctgatttatcgcggcaaacgtttggtcaactgggacccggtgctccacacc
gccgtgtcagacttggaagttatttccgaagaagaacaaggcaatatgtggcatttgcgt
tatccgctcaccaacggtaacggtcacttagtagtagccacaacccgccctgaaaccatg
ctgggcgaccaagcagtggctgtgcatcctgaagacgagcgttataaacacctgatcggc
caaactattactttgccgttagttgggcgtgagattccgattatcgccgatgactatgtt
gatccggcatttggaaccggttgcgtcaaaatcaccccggcgcacgactttaacgactat
gaaatgggcaaacgtcataacctgccgatgttaaatgtcttcaccaaagacgcagcgatt
aacgaagaagcaccgggaaaatatcaaggcctcgaccgttacgaagcacgtaaacaaatc
gtcgccgatttggaagcgctggatctcgtcgaaaaaattgagccgcataagctgatggtg
ccacgcggcgaccgtactcatgcggtgatcgagccgatgctgactgaccaatggtatgtt
gcggtgcaagaactggcgaaaccggcgattgacgcggtgaaaaacggtgacatcgaattt
gtgccgaaaaactgggaaaacacctattttgaatggatgaacaatattcaagactggtgt
atttcgcgccaaatctggtggggacaccgtattccggcttggtacgacgaccaaggcggt
gtgtatgttggtcgtgatgaagccgaagtgcgtgccaaacataatttgggtgatcgcccg
ttacatcaggatgatgatgtgcttgatacctggttcagttcggcgttatggacgttttcg
accctcggctggccggagcaaacgccggaactggaaaaattccacccgacttcggtattg
gtaaccggcttcgacattattttcttctgggtcgcgcggatgattatgatgacccttaaa
ttcaccggccaagtgccgtttaaacaagtttatgtgcatggtttggtgcgcgatgccgaa
gggcaaaaaatgtccaagtcgaaaggcaatgtgctcgacccgattgacttgattgacggc
attgatttggaaagcctggtaaataaacgcacctacggcatgatgcaaccggaaaaagcc
gccaaaattgaaaaagacacccgcaaacaatttgccgacggtattccggcatttggcacc
gatgcgatgcgtttcacctttgcctcgctcgcctcgaccggacgcgatatacggtttgac
ctcaatcgctgtgaaggttatcgcaacttctgcaataaattgtggaacgccacccgttat
gtcttaatgaacacccaagggtttgataccggggtcgatgaaagccaaccgattgagtta
tcgctggccgaccgttggatcgtctcgcgcctacaaacgctagaaaccgaagtggtgcgt
cattttgaacaataccgttttgatatggcggcgaatctcttgtatgaatttacctggaac
gaatactgcgattggtatttagagctgtcaaaaccgattcttaacaaagattcatccgat
gccgccaaacgcggcacacgccgcacgctggtgcgtgtgttagaaaccctgttgcgctta
ttgcatccggtaatgccttacattaccgaagaagcttggcaagcggtcgcgccgttagcc
gctaaacagggcaagaccatcatgttgcaaccttacccagaagcggacgaaagcaagatt
gacttggctgccgaagccgaactggactgggtgaaacaatttattatgggtgtgcggcgt
atccgttcggaaatggatattgcaccgggcaagcccctgcctgtgctactcagcaaagta
tcggcgcaagaccaggcctggttggataacaaccgtctgttcttaatgacactggcaaag
cttgaatcgattgaagtcttagccaatgaaaccgatgcgccggaatccgctatgtcactg
gttggcgagatgaatattctcattccgatggcaggcctgattgacaaggatgcggagtta
gcacgcttggataaagaaatcagcaaactcaaagccgaatttgaacgtttgaacgctaaa
cttagcaatgaaagttttgtctcgcgcgcacccgaagccgtggtggcaaaagaacgtgct
aaactagacgacattcaaaccgccctaagtaatctggagcaacagtatggcaaaattgag
caactctaa
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